KEGG   Vitis vinifera (wine grape): 100854449
Entry
100854449         CDS       T01084                                 
Name
(RefSeq) autophagy-related protein 18b isoform X2
  KO
K17908  autophagy-related protein 18
Organism
vvi  Vitis vinifera (wine grape)
Pathway
vvi04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:vvi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    100854449
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vvi04131]
    100854449
   03029 Mitochondrial biogenesis [BR:vvi03029]
    100854449
Membrane trafficking [BR:vvi04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    100854449
Mitochondrial biogenesis [BR:vvi03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    100854449
SSDB
Motif
Pfam: PROPPIN WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_Vps41 Beta-prop_WDR90_POC16_2nd WD40_CDC20-Fz WD40_MABP1-WDR62_1st BCAS3_WD40 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55
Other DBs
NCBI-GeneID: 100854449
NCBI-ProteinID: XP_003633169
LinkDB
Position
11:join(9966905..9966963,9967089..9967162,9978171..9978244,9978369..9978478,9987306..9987397,9999255..9999367,10003684..10003803,10004284..10004429,10004878..10004988,10005536..10005601,10006890..10007031)
AA seq 368 aa
MANHSSSYPILCASFNQDTSYFAIGTRDGFKVFDSETGTLRYERAIGGFIIVEMLFSSSL
LAIVGAGEQPSLSPRRLCLFNTTTGAALRELNFLTSVLAIRLNRKRLVVVLQEKTYIYDL
NSLSILDTIDTVPNSKGLCAFSPSLDGCFLALPASTTRGSVLVYNVMELHSHCEIDAHRS
PLAAIVFSPNGMYIATASEQGTIIRVHLISEATKSYSFRRGAYPSTIFSLSFGPSTQFPD
VLVATSSSGSVHAFSLGLGMNQRSRRSSSFFGSIIPDSVNDVLDPAHHVLHNVVPAGVKS
YAVIRKVDRVPGTSISESVAYRATVSIITHSGSFQEYTLIINQKNESSWRLERRFDLLTA
ISDNIISS
NT seq 1107 nt   +upstreamnt  +downstreamnt
atggcaaatcattcctcatcatacccaatcctctgcgcttccttcaatcaagatacaagt
tactttgcgattggcacgagggatggattcaaagtgttcgattccgaaacagggactcta
cgttatgagcgagctattggaggtttcatcattgttgagatgctgtttagctctagtctt
cttgccattgttggagctggtgagcagccatctttatccccacgccgtctctgtttgttc
aacactacaactggagctgccctccgagaactaaattttttaacttctgtccttgccatt
cgtctaaataggaaaagacttgttgtagtgttgcaagaaaagacatacatttatgatcta
aatagcctctctatcttggacactatagatactgtgccgaattcaaaaggactttgtgca
ttctcccctagtttggatggttgctttttggctcttccagcaagcacaaccagaggatct
gtgttagtgtacaacgttatggagctccattcacattgtgagatagatgctcaccgctca
ccactggctgcaattgtcttctctcccaatgggatgtacatagcaacagcatctgagcag
ggaaccataatcagagttcatctcatttcagaggcaactaagtcttacagttttagaagg
ggggcatacccttccactatattttccttgtcatttgggccatctacacaatttcctgat
gtacttgtagccacaagttcttcaggctctgttcatgctttctctctgggacttggcatg
aatcaaagaagcagaagatcaagtagtttctttggatctattatacccgactctgtaaat
gatgtgttggatccagctcatcatgtacttcacaatgttgtgcctgcaggagttaaaagt
tatgcggtgattcgcaaggttgacagagttccaggcacatctatatctgaatctgtagct
tacagggctactgtgtctattatcacccacagcgggtccttccaggaatacaccttaatt
atcaaccaaaaaaatgagtcatcatggcgtttggagcgccgattcgacctcttaacagca
atttcagataacatcatcagttcatga

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