Vitis vinifera (wine grape): 100854449
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Entry
100854449 CDS
T01084
Name
(RefSeq) autophagy-related protein 18b isoform X2
KO
K17908
autophagy-related protein 18
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
100854449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vvi04131
]
100854449
03029 Mitochondrial biogenesis [BR:
vvi03029
]
100854449
Membrane trafficking [BR:
vvi04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
100854449
Mitochondrial biogenesis [BR:
vvi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100854449
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_THOC3
BCAS3_WD40
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
WD40_CDC20-Fz
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_RIC1_2nd
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Motif
Other DBs
NCBI-GeneID:
100854449
NCBI-ProteinID:
XP_003633169
UniProt:
A0ABY9CVD9
LinkDB
All DBs
Position
11:join(9966905..9966963,9967089..9967162,9978171..9978244,9978369..9978478,9987306..9987397,9999255..9999367,10003684..10003803,10004284..10004429,10004878..10004988,10005536..10005601,10006890..10007031)
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AA seq
368 aa
AA seq
DB search
MANHSSSYPILCASFNQDTSYFAIGTRDGFKVFDSETGTLRYERAIGGFIIVEMLFSSSL
LAIVGAGEQPSLSPRRLCLFNTTTGAALRELNFLTSVLAIRLNRKRLVVVLQEKTYIYDL
NSLSILDTIDTVPNSKGLCAFSPSLDGCFLALPASTTRGSVLVYNVMELHSHCEIDAHRS
PLAAIVFSPNGMYIATASEQGTIIRVHLISEATKSYSFRRGAYPSTIFSLSFGPSTQFPD
VLVATSSSGSVHAFSLGLGMNQRSRRSSSFFGSIIPDSVNDVLDPAHHVLHNVVPAGVKS
YAVIRKVDRVPGTSISESVAYRATVSIITHSGSFQEYTLIINQKNESSWRLERRFDLLTA
ISDNIISS
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcattcctcatcatacccaatcctctgcgcttccttcaatcaagatacaagt
tactttgcgattggcacgagggatggattcaaagtgttcgattccgaaacagggactcta
cgttatgagcgagctattggaggtttcatcattgttgagatgctgtttagctctagtctt
cttgccattgttggagctggtgagcagccatctttatccccacgccgtctctgtttgttc
aacactacaactggagctgccctccgagaactaaattttttaacttctgtccttgccatt
cgtctaaataggaaaagacttgttgtagtgttgcaagaaaagacatacatttatgatcta
aatagcctctctatcttggacactatagatactgtgccgaattcaaaaggactttgtgca
ttctcccctagtttggatggttgctttttggctcttccagcaagcacaaccagaggatct
gtgttagtgtacaacgttatggagctccattcacattgtgagatagatgctcaccgctca
ccactggctgcaattgtcttctctcccaatgggatgtacatagcaacagcatctgagcag
ggaaccataatcagagttcatctcatttcagaggcaactaagtcttacagttttagaagg
ggggcatacccttccactatattttccttgtcatttgggccatctacacaatttcctgat
gtacttgtagccacaagttcttcaggctctgttcatgctttctctctgggacttggcatg
aatcaaagaagcagaagatcaagtagtttctttggatctattatacccgactctgtaaat
gatgtgttggatccagctcatcatgtacttcacaatgttgtgcctgcaggagttaaaagt
tatgcggtgattcgcaaggttgacagagttccaggcacatctatatctgaatctgtagct
tacagggctactgtgtctattatcacccacagcgggtccttccaggaatacaccttaatt
atcaaccaaaaaaatgagtcatcatggcgtttggagcgccgattcgacctcttaacagca
atttcagataacatcatcagttcatga
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integrated database retrieval system
