Vitis vinifera (wine grape): 100855354
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Entry
100855354 CDS
T01084
Name
(RefSeq) rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
100855354
Enzymes [BR:
vvi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
100855354
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Motif
Pfam:
CBM-like
Rhamnogal_lyase
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
100855354
NCBI-ProteinID:
XP_059594572
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Position
7:complement(join(24895671..24895907,24895998..24896124,24896194..24896310,24896425..24896578,24896736..24896877,24896976..24897066,24897154..24897260,24897353..24897508,24897721..24898027,24898139..24898251))
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AA seq
516 aa
AA seq
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MLRGSSGFYAYAIYERLQGWHGTSLWQTRLVFKLQEDLFDYMAISDTRQRVMPTAEDRAR
GKPLAYPEAVLLTNPSNPDLKGEVDDKYQYASDSKDNKVHGWISQKSGVGFWIITPSDEF
RISGPLKQELTSHAGPVSLSVFTSSHYVGKPEEEIFKDGEAWKKVFGPIFIYLNSVSNKK
EALSLWNDAKQQMLKEVDSWPYSFPLSQDFPKSHQRGSVQGRLLVLDKYINQAPTPASLA
YVGLSLPGEAGSWQTETKGYQFWTQADKEGTFSIRAVRAGTYNLFAWVPGIMGDYKYDAI
ITIKPGNKIKLGNIVFEPPRHGPTLWEIGIPDRTAAEFFVPDVDPKFINKLYVKQDKFRQ
YGLWDRYADIYPNQDLVYTVGKSDYRKDWFFAHVNRHVTDDTFLGTTWQIVFDLPVVDMA
ATYKFRLVLAGASLAQLQVRLNDPNATRPLLSTELIGRENLIARHGIHGLLRSYTADIPG
FLFVEGCNTIYLTQTRASNSFQGVMYDYIRLEGPPQ
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtggctcctcagggttctatgcatatgccatatatgaacgcttacaaggatgg
catggcacatctctatggcaaaccagacttgttttcaagcttcaagaagacctgtttgac
tacatggccatctcggacaccagacaaagggtgatgccaacggctgaagatcgtgcaagg
ggtaagccccttgcctacccggaagctgttctgctaacgaacccatccaatcctgacctc
aaaggagaggtggacgacaaataccaatacgcttctgatagcaaagacaataaggtacat
gggtggatcagccagaaatctggagtagggttctggattatcacgcccagtgatgaattc
cgaatttctggacctctcaagcaagagctcacctctcatgctggccctgtctccctttct
gtgtttacgagttctcattacgttgggaagcctgaagaagaaatatttaaagacggggaa
gcatggaaaaaggtttttggtcctattttcatttatctgaactcggtttcaaacaaaaaa
gaggccctttcactctggaacgacgccaaacaacagatgttgaaagaagttgacagctgg
ccatatagcttcccactctcacaggacttccccaagtctcatcaacgcggatctgtccag
ggtcgtttactagtcctggacaaatacatcaaccaagcacctacaccggcaagccttgct
tacgtgggattgagtctacctggtgaagcaggatcatggcaaacagagaccaagggttat
cagttttggacacaagctgacaaggaggggactttctccattagagctgtccgagccgga
acctacaatttgttcgcctgggttcctggtatcatgggggattacaaatatgatgccatt
attaccatcaaaccaggaaataaaatcaaactggggaatattgtatttgagcctccaaga
catggacctacactctgggaaatcggcatcccagaccggacggctgctgaattcttcgtg
cccgacgtcgacccaaaatttattaacaaactatatgtcaaacaagacaagttccggcaa
tacggattatgggaccggtatgcagatatatatccaaaccaggatctcgtgtacactgtg
ggtaaaagcgattaccgaaaagattggttctttgctcatgtgaacaggcacgtgaccgat
gacacattcctaggaaccacatggcagattgtatttgatcttccagttgtggacatggcc
gccacttacaaatttcgattggtgttggcaggagcaagtctggctcaattgcaggttcgg
ctcaacgacccgaatgcgacacggccacttctatcaacagaactaatagggagggagaac
ctgatagctagacatgggattcatgggctactacggtcgtatacggcagatatacccggg
ttcctctttgttgaaggttgcaatacaatctatttgactcagacgcgagcctcaaactct
ttccagggagtcatgtatgactacatccgtttggagggtcctccccagtag
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