Vitis vinifera (wine grape): 104877626
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Entry
104877626 CDS
T01084
Name
(RefSeq) protein transport protein SEC13 homolog B
KO
K14004
protein transport protein SEC13
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi03013
Nucleocytoplasmic transport
vvi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104877626
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104877626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvi03019
]
104877626
04131 Membrane trafficking [BR:
vvi04131
]
104877626
Messenger RNA biogenesis [BR:
vvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104877626
Membrane trafficking [BR:
vvi04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
104877626
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
104877626
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
104877626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
WD40_2
Motif
Other DBs
NCBI-GeneID:
104877626
NCBI-ProteinID:
XP_059591403
LinkDB
All DBs
Position
19:8992546..8993463
Genome browser
AA seq
305 aa
AA seq
DB search
MPSQKIKTGHQDTVHDVAMDYYGKRVATASSDSTVKIIGVSNNASQHLATLTGHQGPVWQ
VAWAHPKFGSILASCSCDGRVIIWKEGNQNDWTQAHVFSDRKSSVNSIAWAPHELGLCLA
CGSSDGNISVFTARSDGAWDTTKIDQAHPVGVTSVSWAPSMAPGALVGSGLLDPVQKLVS
GGCDNTVKVWKLYNGNWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGTVVIW
TVGKEGDQWEGKVLKDFKTPVWRVSWSLTGNLLAVADGNNNVTLWKEAVDGEWQQVTTVD
PYHLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgccttcacagaagatcaaaacaggtcaccaggacacagtccatgatgttgccatggat
tactatggaaagagagtggcaacagcttcatctgatagcaccgttaagataattggtgtt
agcaataatgcttcacaacaccttgctactttgactggccatcaaggccctgtttggcag
gttgcttgggcacaccccaagtttggatcaatccttgcttcttgttcctgtgatggccga
gtgataatctggaaggaaggaaatcaaaatgactggacacaagctcatgttttcagtgat
cgtaaatcatctgtcaactccattgcctgggcacctcatgaacttggcctctgcttggct
tgtggatcctctgatgggaatatctctgtcttcactgctaggtctgatggcgcttgggac
accacaaagatagatcaagctcaccctgttggagtaacctcagtttcatgggccccatca
atggctcctggtgctctggttggatctggtctgctggatcctgttcagaagctggtttct
ggtggctgtgataatactgtgaaggtgtggaagctatacaacgggaattggaagatggac
tgtttccctgctcttcagatgcatacagattgggtaagggatgtggcttgggcacccaac
ttggggcttccaaagtccacaattgcaagtgcttcacaggatggaacagttgtaatatgg
actgtgggcaaggaaggtgatcaatgggagggtaaagttttgaaggatttcaagacccca
gtttggagggtctcatggtcgctgactggaaacctattggctgtggctgatggaaacaat
aatgtgacattatggaaagaagcagttgatggtgagtggcaacaggttactacagtggac
ccatatcatttagcctga
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integrated database retrieval system
