Vitis vinifera (wine grape): 104878208
Help
Entry
104878208 CDS
T01084
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00040
Pentose and glucuronate interconversions
vvi01100
Metabolic pathways
Module
vvi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104878208
Enzymes [BR:
vvi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104878208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
PaaX
Motif
Other DBs
NCBI-GeneID:
104878208
NCBI-ProteinID:
XP_010646456
UniProt:
A0A438KRL7
D7SYQ4
LinkDB
All DBs
Position
7:join(21925786..21926328,21926445..21926734,21926860..21927088,21927181..21927405)
Genome browser
AA seq
428 aa
AA seq
DB search
MHILPIITSYSTLNSPHPTHTPLQNTNMGKPLHISFSLSFFFTFVFFILHPSSATNVYNV
ISFGAKGDGLTDSTKAFTDAWAAACASIASTTSIIFVPRGRYLLRPAVFAGQCTRTRIII
LIKGTLVAPSDYRILGKADSWFSFEGVSGVSILGGVLDARGHALWACKAAGNQQHCPSGA
TTLSFTNSNNIMIKGVLSVNSQMFHIVINGCNNVRLQGISIKAPESSPNTDGIHVQLSAN
IAIVRSIIRTGDDCISIGPGTRNLWIERVKCGPGHGISIGSLAKDMEEEGVENVTVRTAV
FTGTQNGLRIKSWPRPSKGFVNGVHFRGAIMDNVQYPIVIDQNYCPGDEDCPSQESGVKV
SNVTYKEIEGTSATEVAIKFHCSATDPCTFLRLEDVKLSYVNDERVAQSFCRYANGKAYG
LVQPDSCF
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcatattctcccaatcatcacctcttattcaactctcaactctcctcatcccacacat
acacccttacaaaacacaaacatggggaagcccttgcacataagtttctctctctctttc
ttcttcaccttcgtcttcttcatcttacacccttcatccgctactaatgtttacaatgtc
attagttttggagctaaaggcgatggtctaacggactccaccaaagcattcactgatgca
tgggctgcagcatgtgcctccatcgcttccaccacctccatcatatttgtaccaagagga
cgctatttgcttcgccctgctgtgtttgcaggccaatgcacaagaacccgtatcatcatt
ctcattaaaggcaccctggtggctccatctgactaccgcattctcgggaaagcggacagt
tggttcagctttgaaggagttagtggcgtttccatcttgggaggggtcctggacgccaga
ggacatgccttgtgggcttgcaaagctgccggaaaccaacagcattgccccagtggggcc
acgaccctcagttttaccaactccaacaacattatgataaagggagtgctatcagtaaac
agtcagatgttccacattgtcataaatggctgcaacaatgtgcgccttcaaggaatcagc
atcaaagcacccgaaagcagcccaaacacagacggcattcacgtccagttatcggccaac
atcgccattgtccgctccatcatcagaactggtgatgactgcatatcaatcggcccaggc
acccgtaacctgtggatagaacgtgtgaaatgcggtcctggtcacggcattagcatagga
agcctagccaaggacatggaagaagaaggggtggaaaatgtgacagttaggacggcagtt
tttacaggtactcaaaatgggctcaggatcaagagttggcccaggcccagcaaaggattc
gttaatggggtccatttccgaggagccatcatggacaatgtccaatatcccattgttata
gaccaaaactactgtcctggtgatgaagattgcccttctcaggagtcgggtgtaaaagtg
agtaatgtgacatacaaggaaattgaagggacatcggcgactgaggttgcaatcaaattc
cattgtagtgctacggatccatgcacatttctaagactagaagatgtgaaactatcttat
gtaaatgatgagagagtggctcaatccttttgtagatatgcaaatggaaaggcctatggc
ttggtccaaccagatagttgtttctaa
DBGET
integrated database retrieval system
