Vitis vinifera (wine grape): 104878757
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Entry
104878757 CDS
T01084
Name
(RefSeq) zinc finger CCCH domain-containing protein 19
Organism
vvi
Vitis vinifera (wine grape)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
SWIB
GYF
zf-HC5HC2H
GYF_2
zf_CCCH_4
C5HCH
DUF6017
C1_2
Motif
Other DBs
NCBI-GeneID:
104878757
NCBI-ProteinID:
XP_010647669
LinkDB
All DBs
Position
3:complement(join(540179..542808,542904..543058,544558..544628,546733..546783,546867..546926,547314..547441,547548..548472,550163..550350,551801..551880,552015..552427))
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AA seq
1566 aa
AA seq
DB search
MEEEDDALNDGYKPPSPRQGDSAIGDEVLPQSIDQCDVVSELDDSQLVGAASPAAVAEPE
EEEDVEAIAGEEAEAEAEAEAEAEAGVEVAEGGRGGGGRRKRGRNPRVPARAPLKKSFEE
DVCFICFDGGDLVLCDRRGCPKAYHTTCVNRDEEFFRAKGKWNCGWHQCTACEKNSYYMC
LTCPFSLCKNCIKDSVIFCVRENKGFCEACMKIIMLIEKNEQGNKEMDQVDFDDKSSWEF
LFKDYWIDLKGRLSLTSDELAQAKNPWKGSDAPAGKQEAPDEPNDVYNDGGPGSDSSSGN
VEARKPKRRKAKKRLKSLNKERDSPSVATAIGAEGTSTPANTEWASKELLEFVMHMKNGD
KSVTSQFDVQALLLEYIKRNKLRDPRRKSQIICDSRLEYLFGKPRVGHFEMLKLLESHFL
NKEDSQTDDLQGSVVDSEASQLEVDGNTDTLMKVGKDRRRKARKKGDERGSQSNLDDYAA
IDIHNISLIYLRRNLMEDLIEDTEKLHDKVVGAFVRIRISGSGQKQDVYRLVQVVGTSKA
ADPYKVGKRTTEVMLEILNLSKTEIISIDIISNQEFTEDECMRLRQSIKCGLITPLTVGG
ILEKALALQAVRVKDWLETEIVRLSHLRDRASEKGRRKELRECVEKLQRLKTAEERQRRL
EEIPEVHADPNMDPSYESEEDESETDDKRQENHLRPRDTGFSRKRMEPSSSRKGDSGSNY
SWSTPTKNSSRNWEFSRSMSNKVFSSKSEDVASPDEIMNEDSWNRRDTQKLSRWEKISGS
NSEVGGWNSHSVVRSESFSTVPLESPMASHSGVRSESFSGIALDSSVAAHSVGRSESFSG
VALESSSGPPLTGVEPTAAKLSETDKMWHYQDPSGRVQGPFSLVQLRKWSNSGFFPKDLR
IWRTTEKQDDSALLTDVLFAAFPKDSSPVDNSIGKSQNVHTLPHPSTDSGKPYESSLQQV
GENQGGEKPNLDHRGENWRSQQEVSLSKGWAASSMVEAPKLSTDGSVSDYDGRNDLANLP
SPTPAQSTTGWVAGQAPDKKGTATEFPVQPAVDPFLGSSGTLLSPTAVTSENGQLIHSST
SPSSVKQSAGVDSSDLSFASFSQQTSVPGRKEHNVIELLGALVPSSVSNSSANAPEVHPQ
SSVSGESQSVQADAYPLAAPDFAAGSMNPGATDSKVAGASLPNLVHSVAGLSHPVETHGW
GSGSISKPEIVSSCPVSGGESQTWGYGPPQKLERNNSIPMHSQQPPYGHWVDASSIHNSA
SSLGTGNLAGYFPSPGLGLPLSDSWRPQVPSNPPNFQPPPPGNLGPPALPNLAPSVPPNM
GPRAPPSFGPPAPTNLGHPTPPNLGPPAPPNLNPLPPPPILTPSVPPNMISAAPPNLVPL
GPPNIIPPGPPNMISPAPPAMIPPAPPNLAPAAPPNLPWGMGVAENPSAAPRPGPQNPNA
GWGPMPGNPNMSWGPVPGNTNMNWGASGQASAPGNAIPSWVAPTGNQGMWGSDQNHNGDR
FSGQRDRGSQGGDPGYGGGRPWNRQSSFGNGGGGGSGRSTPKGQRLCVYHENGHCKKGAS
CDYRHS
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaagacgacgctttaaacgacggctacaaaccgccctctccacggcaaggg
gactcggccattggtgacgaagtgcttccgcaaagcatcgaccaatgcgacgtcgtttca
gagctggacgattcgcagcttgtgggcgccgcgtctcctgctgctgttgcggagccggag
gaggaagaggacgtggaggcgatcgcgggagaggaggcggaggcggaggcagaggctgag
gcggaggcggaggccggcgtggaggtcgcggagggaggtcgaggcggcgggggcaggagg
aagaggggccggaatcctagggttccagcgcgggctccgctgaagaagtcgtttgaggag
gacgtttgcttcatttgcttcgatggcggtgatcttgtgctctgtgatcgcaggggatgc
cctaaggcctaccatactacgtgtgttaatcgtgacgaggaattctttcgagccaagggc
aaatggaattgtggttggcatcaatgtactgcttgtgagaagaattcctattatatgtgt
ttgacatgtccattttccttgtgcaagaactgcatcaaagattctgttatcttttgtgtt
agagaaaacaaaggcttctgtgaggcatgcatgaaaattatcatgttgattgaaaaaaat
gagcagggaaacaaggaaatggatcaagttgatttcgatgacaaaagtagctgggagttc
ctcttcaaggattactggatagatttaaaaggaaggctatctctaacatcagatgaactt
gctcaggctaaaaatccgtggaaagggtctgatgcacctgctggaaaacaggaagcaccg
gatgaacccaatgatgtttacaatgatggtggtcctggttcagacagttcctctggaaat
gtagaagcaaggaagcccaaaagaagaaaggccaagaaacggttgaagtcactcaataag
gagagggattcaccgagtgtagcaacagcaattggagcagaaggaacgtctacgcctgcc
aacactgagtgggcatcaaaagagctcttggagtttgttatgcatatgaagaatggggac
aaatccgttacaagtcagtttgatgtacaagccctcttgctagaatatataaaaagaaac
aaacttcgtgatcctcgccgaaaaagtcaaataatttgcgattcaagacttgaatatctt
tttggaaaaccacgtgttgggcattttgaaatgttaaaacttcttgagtctcactttctt
aataaagaggattcacagacagatgatctacaagggagtgttgttgatagtgaagctagt
cagttggaggttgatggtaataccgacaccctaatgaaagtgggtaaagataggagacgt
aaagcacgtaaaaagggtgatgagagaggatctcaatcaaatcttgatgattatgcagct
attgatatccacaacattagcttaatttatttacggcgtaatttgatggaggatttaatt
gaagatactgaaaagttacatgacaaggtggttggtgcttttgtgagaataaggatttcc
ggtagtggacaaaagcaagatgtgtataggctagtccaagttgtaggtacaagcaaagca
gctgatccatataaagttggcaaaaggacaacagaagttatgctagaaattttaaattta
agcaagacagaaatcatatcaattgatataatttcaaatcaggagttcactgaggacgaa
tgtatgcgtctacgtcagagtataaaatgtggattaatcaccccattgacagtgggtggc
attctggaaaaagcgttagcacttcaagcagtcagagtcaaggattggctggaaacagag
attgtgcggcttagtcatcttcgcgatcgagctagtgaaaaggggcgcagaaaggagctt
agggaatgtgtcgagaaattgcagcgtttgaagacagctgaggagcgccagcgcaggctt
gaggaaattccagaagtccatgcagacccaaatatggatccaagttacgagtctgaggaa
gatgaaagtgagacagatgacaagagacaagaaaatcatttgagaccaagagatacaggc
tttagcaggaagaggatggaacctagctcttcaaggaaaggagattctggttcaaattat
tcctggagtacaccaacaaaaaattctagtagaaactgggaattcagcagaagtatgtca
aataaagttttttcaagcaaaagtgaagatgttgctagccctgatgagatcatgaatgag
gattcatggaatagaagagacacacagaaactgagcaggtgggagaagataagtggttct
aattctgaagttggtggctggaatagccattcagtggtaagatctgaatcattttcaacc
gtgccattagaaagtcccatggcatcccattcaggagtaagatcagaatcattttctgga
attgcattagacagttctgtggcagcccattcagtgggaaggtctgaatcattttctgga
gttgcattagaaagttcctccggacctcccttgacaggggtagaaccaactgctgccaaa
ctcagtgaaacggacaaaatgtggcattaccaagatccttctggaagagtccaaggacca
ttttctctggtgcagctgcggaaatggagtaatagtgggttcttccccaaggatctcaga
atttggagaactactgaaaagcaggatgactctgcacttttgactgacgtattgttcgca
gcattcccaaaagattcatcaccagttgacaacagcattggaaagtcccaaaatgtgcat
actctgcctcacccatccacagattctggaaagccatatgaatcatccttgcagcaagta
ggtgaaaatcaaggtggggagaagccaaatcttgatcatagaggagaaaattggagatct
caacaagaggttagtttgtccaagggctgggctgcttcatctatggttgaggctcctaaa
ctttccacagatggttcagtttctgactatgatggcaggaatgatttggcaaacctccct
tctcccactcctgcccaaagcaccactggttgggttgctgggcaagctcctgataaaaaa
ggcacagccactgagtttcctgttcaaccagcagtggatccatttttaggttcctctgga
acgctattatctcctactgcagtgacctcagagaatggccagttgatacattcttctact
tcaccatcttcagtcaagcagagtgcaggtgttgatagttcagatctatcttttgcatca
ttcagccaacaaacaagtgttcctggtaggaaagaacataatgtgattgagcttttagga
gcattggtgcctagttcagtctcaaattcctctgcaaatgctccagaggttcatcctcaa
tcgtctgtgtcaggtgaatcacagagtgttcaggcagatgcatatccacttgctgcacct
gattttgctgctggctcaatgaacccaggtgctactgattctaaagttgcaggtgcaagt
ctcccaaacctggttcattctgttgcgggtcttagccatcctgttgaaactcatggatgg
gggtctggttcaatttcaaagccagaaatagtatcttcctgcccagtatctgggggtgaa
tctcaaacctggggatatggtccacctcagaagctagaacgaaataattctattcctatg
cattcacaacagccaccatatggtcactgggttgatgcttcttctatccataattctgct
tcatctcttggcacaggaaatctagctgggtatttccctagtccaggcctaggtttgcct
ctatctgattcttggagacctcaagttccaagtaatccaccaaacttccagcctccacct
cctggcaaccttggtcctccggctctgcccaacctagctccttctgttccacctaacatg
ggccctcgagctccacccagctttggccctccagctccaaccaatctaggccatccaacc
ccacccaatctgggccccccagctccacctaacctgaaccctctgcctccacctccaatc
ctgactccttcagtgccacccaatatgatctctgcagccccacccaacctagtccctctt
ggtccaccaaacattatccctccgggtccacccaacatgatctcccctgctccacccgct
atgatcccaccggccccacccaacctggctccagctgccccacccaacctaccttggggt
atgggtgttgcagaaaatccaagtgctgccccaaggccagggccacagaatccaaatgct
ggctggggtccaatgcctggaaatccaaatatgagctggggaccagtaccaggaaacaca
aacatgaactggggagcttctggtcaagcgtcagcacctggaaatgcaattccaagttgg
gttgcaccaacagggaaccaaggcatgtggggaagtgaccaaaatcataatggtgataga
ttctcaggtcaaagggacaggggttcccagggtggagatcctggttatggcgggggcaga
ccttggaatcgccaatcatcatttggcaatggagggggaggaggttctggtagatcaacc
cctaaagggcagagattgtgtgtgtatcatgagaatgggcattgcaagaagggagcatca
tgtgattatcggcacagttga
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integrated database retrieval system
