| Entry |
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| Name |
(RefSeq) transcription initiation factor TFIID subunit 4b
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| KO |
| K03129 | transcription initiation factor TFIID subunit 4 |
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| Organism |
vvi Vitis vinifera (wine grape)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:vvi00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104878830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:vvi03021]
104878830
03036 Chromosome and associated proteins [BR:vvi03036]
104878830
Transcription machinery [BR:vvi03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104878830
Coactivators
SAGA/TFTC/STAGA complex
104878830
Chromosome and associated proteins [BR:vvi03036]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
104878830
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
3:complement(join(7003494..7003666,7004141..7004387,7005051..7005116,7005199..7005306,7005404..7005460,7005539..7005594,7006393..7006525,7006631..7006718,7006848..7006963,7007832..7008085,7008349..7008493))
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| AA seq |
480 aa
MQIHQTCPASLITVNKERKLPADPFRGLNKQQQVNIAQTSSLTTSREVGSQEHRSDAPEP
VDKTAAPLQLSASLGSSSLGAVQAGQQDERTPETSQCKSSLEHPRAVLAADASIVPTSSA
THSMTLKLDSTFLTSSAATSFGATANANRTLKRPLGQEKPIQAFLTPFPSSSKRIKVTAT
SPTPIIEELNDVTAISEINLREEEEHLFSGDKEECQASKPVPRVIEQEKRLTLQKSALQK
KLAQIISKCGIGSMSNDVESCLSSSVEEIMQGLIRNMIRLSKQRVDFEKTRHHAIITSDV
QNKILMMNLKVKDDLKLHKAEGGTEGDADIDKDVGFLKTSKANEMKRLTDSRVQRKAANV
AARVAVGGDDLTLRWQVMAKKAQQKSDGAFGKSFVVQQSKDMKHMRSPTSGRRVGDSQEL
HAKGTKSRVGENQSARPQSKVVRSVSIKDLLATLEREPQMAKSALTQRLRERIHSDGTAN |
|---|
| NT seq |
1443 nt +upstreamnt +downstreamnt
atgcagatacaccaaacatgtcctgccagcctgattactgtcaataaagaaaggaagctc
cctgcagatccattcagaggacttaacaagcagcaacaagtgaacattgcacaaacttcc
tccctcacaaccagcagagaagttggtagtcaagagcacagaagtgatgcacctgaacca
gttgataagactgctgcaccattgcagctctcagcttcactgggttcatcttctttgggt
gctgtacaggctggccagcaagatgaaagaacaccagaaacatcacagtgtaaatcttca
ttggagcatcctagagcagttttagcagcagatgcaagtattgtgcctacaagttcagct
acacattccatgactttaaaacttgactctacttttctgacctcatctgcagcaacttca
tttggggcaacagctaatgccaatagaaccctgaagagacctcttggccaggagaaacca
attcaagcatttttaactccatttccatcctcaagtaaaagaataaaggtaactgcaacc
tctcctactccgatcatcgaagaactcaatgatgttactgccataagtgaaattaattta
agggaggaagaagagcacctgttttctggggataaggaggaatgccaagcttcaaaacca
gtaccaagggttatagaacaagaaaaaaggttgactttgcagaaatcagctcttcagaaa
aaacttgcacaaatcatatccaaatgcggaattggaagtatgagcaatgacgtggagagt
tgcctgtcatcgtctgtggaagaaataatgcaaggattgataagaaatatgatcagattg
tccaaacagagagttgattttgagaagacaagacaccatgctatcataacttcggatgtt
caaaataaaattttaatgatgaatctgaaagttaaggatgatctaaaactacacaaggct
gaaggaggaacggagggtgatgctgatatagacaaggatgtaggttttctgaaaacatcc
aaggcaaatgaaatgaaaagactaacagatagtagagtgcaaagaaaagcagccaatgtt
gctgccagggtagctgttgggggagatgacttgacattaagatggcaagttatggctaag
aaggcccagcagaagagtgatggggcatttggcaaatcatttgttgttcagcaaagcaag
gacatgaagcacatgcgttcaccaacatcgggaaggagagtaggagatagtcaagaattg
catgcaaaagggaccaaaagcagagtgggagagaaccaatctgcgagaccacagtcgaag
gtggtgcgatcagtctctatcaaggacctgttagcaacactggaaagagaaccgcaaatg
gcaaaatcagctttaacccagcgcttgcgtgagagaattcattctgatggaacagccaac
tga |
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