Vitis vinifera (wine grape): 104880300
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Entry
104880300 CDS
T01084
Name
(RefSeq) uncharacterized protein LOC104880300
KO
K04485
DNA repair protein RadA/Sms
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvi03400
]
104880300
DNA repair and recombination proteins [BR:
vvi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
104880300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
DnaB_C
AAA_22
SLFN-g3_helicase
NACHT
AAA_16
AAA
AAA_19
GvpD_P-loop
nSTAND3
Zeta_toxin
ABC_tran
AAA_29
AAA_30
Isochorismatase
TsaE
KTI12
Motif
Other DBs
NCBI-GeneID:
104880300
NCBI-ProteinID:
XP_010654899
LinkDB
All DBs
Position
9:join(2917562..2917734,2918322..2918377,2918624..2918682,2918776..2918844,2919695..2919778,2919888..2919995,2920447..2920509,2921264..2921344,2922335..2922400,2922834..2922929)
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AA seq
284 aa
AA seq
DB search
MKQFSEGESGIGGWRASGFEVSENVVRSWLPQQPTETQPQRLTDVNRGINQLNWRIPLHG
PFGSEVARVLGGGLVPGSLVLVGGDPGAGKSTLLLQIAAIIAEGHDDRSSPVVYVSGEES
VEQIGNRADRMRIETEDLFLYSSTDIEDILGQVHHLSPRALVVDSIQTVYLKGVTGSAGG
LLQVKECTSALLRFAKKTNIPVFLIGHVTKSGDIAGPRVLEHIVDVVLYIEGEKHSSHRL
LRSVKNRFGSTDELGVFEMTQLGLQVVSNPSELFLSERNSDSEC
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagttttcagaaggggaaagcggcattggtggctggcgggcgagcgggtttgag
gtgtcggagaatgtggttcgatcgtggttaccccagcaacccactgagacgcagcctcag
agattgacggatgtgaaccgggggattaatcagttgaattggaggattcccttgcatggg
ccctttggatctgaagttgctagggtgcttggtggtggtcttgttccaggttctttggtt
ttggttgggggtgaccctggtgctggcaagagtacgctgttgttacagattgctgcaata
atagctgaagggcatgatgatcgatcaagtccagttgtgtatgtatctggtgaagagagc
gttgaacaaattggaaatagagctgaccgcatgaggattgaaacagaagaccttttctta
tattcaagtactgatattgaggacatactgggacaagttcatcatctttcccctagggct
ctagttgttgattccattcaaactgtatatttgaaaggagtcactggaagtgcaggaggt
ctcttgcaggtgaaggaatgcacatcagccttgctgcgttttgctaagaagactaacatc
cctgtgtttttgattggacatgtgacaaaatctggagacatagccgggcctcgtgtcttg
gagcacattgttgacgttgttttatatattgaaggggagaagcactcatctcatcgattg
cttcggtctgtgaagaatcggtttgggtccactgatgagcttggagtgtttgaaatgaca
caattgggactgcaagttgtttcaaaccccagtgagctgttcttaagtgagcggaactca
gattcggagtgttag
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