Vitis vinifera (wine grape): 104880882
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Entry
104880882 CDS
T01084
Name
(RefSeq) H/ACA ribonucleoprotein complex non-core subunit NAF1
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vvi03009
]
104880882
Ribosome biogenesis [BR:
vvi03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
104880882
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gar1
SR-25
Motif
Other DBs
NCBI-GeneID:
104880882
NCBI-ProteinID:
XP_010657283
UniProt:
F6HIH7
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All DBs
Position
12:join(6862031..6862915,6863903..6863980,6864168..6865337)
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AA seq
710 aa
AA seq
DB search
MVGFVSGDLNQGSKLKDSDDPLDPYEKIDDCGLNFADSFLDFENIDKWIEEMSEPDGVGS
EKVQLAGAEKCTEMAEEGSCKETTFGGPIADGSKPSVNSSEQILDGSDGCAKKLGGESMK
FGNLGSLIEEEMGKVSLVGLEKDSVRVGGDGMESGHLVNNSDTLKTDDLVRDGDESESSS
ESESSTSSSSSSSSSRSGDDDDDPAEEEEEKEEKEEKEGGEEEKEVMGVEGEVEEGEIRD
DYGHHDDDLEEDDDDDEEEEEEEEEEMIAGSDYDGEDDSCGNVKGGAIKSKNEIEALPPV
PPLDVTLQPHHQTLPVGVVSSIIGAKVIVEGAEKHKPLTEGSILWITESRSPLGLVDEIF
GPVKNPYYVVRYNSDSEVPAGINEGTFISFVPEFANHILNERNLYKKGYDASGENDEEVS
DVEFSDDEEEAEHKKTLKMIKRGTNDQKPGNKKNKRKKVKNRDGAWKNGQHSTAADQFFD
DKHSKTPDHDQHHTPQVAASSPFGVGQFFAGGGLVPPYPQMAQVAGFIPPPSGIWASGIM
PCQQQQNTVFPNSFPTDTLPWPPQNHHPHPFQMPMPNGMLFQQQFDPGHAAFPNAVLSSG
QANFFMRPTYPPWPGLGAQSGLNQAAFGMGLQGQHARPIISAGEQGALSSGLPMGQSCDV
QPPAVTQGKIQASQQFNQRASFGRGKKPFHRGGGRFAGGRGGGRGQQQSK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggtaggattcgtctccggagacctcaaccaaggttcaaaactcaaggactccgacgac
ccgcttgatccatatgaaaaaatcgatgattgtggtttaaatttcgcggattcttttctc
gattttgaaaatatagacaagtggattgaagaaatgtcagagccggatggggtaggttca
gagaaggttcaacttgcgggcgctgagaagtgcactgagatggcggaagaagggtcttgt
aaagaaactacgtttgggggtccaattgctgatgggtctaagccaagtgttaatagttcg
gagcaaattcttgatgggtctgatggttgcgcgaagaagttaggaggggagtctatgaaa
tttgggaatttggggtctttgattgaggaagagatggggaaggttagtttggtcgggttg
gagaaggattccgttcgtgttggtggagacggtatggaaagtggtcatttagtaaataat
tcggatactctgaagactgatgatttagtcagggatggtgacgagagtgaaagtagttcg
gagtctgagagttcaacttcttcttcatcatcatcatcttcatcaagaagtggagatgat
gatgatgatcccgcggaggaggaggaggaaaaggaggaaaaggaggaaaaggagggaggt
gaggaagagaaggaggtgatgggtgtggaaggagaagtagaagaaggggagataagggat
gactacggccatcatgatgatgatttagaagaagatgatgatgatgatgaggaggaggag
gaggaggaggaggaagagatgattgctggaagtgattatgatggggaagatgacagctgc
gggaatgttaagggaggagcaattaaatccaagaatgagattgaggctctccctccagtt
cctccattggatgtaaccttgcaaccacatcaccagaccctgcctgtgggagttgtttca
tcgattattggtgccaaagtcattgtagaaggggcagagaagcacaaacctcttactgag
ggttctattctctggataacagaaagcaggtccccattggggctggttgatgaaatcttt
ggtcctgtcaagaacccttactatgtggttagatataactctgatagtgaggtccctgct
gggatcaatgaaggcactttcatctcatttgttccagagtttgccaatcatattctcaat
gagaggaatctttataagaagggatatgatgcatctggagagaatgatgaagaggtgtca
gatgtggaattttccgatgatgaggaagaggctgagcacaagaaaacgctgaagatgata
aaaaggggaacaaatgaccagaagcctggaaacaagaagaacaaaagaaagaaggttaaa
aatagggatggggcctggaaaaatggtcaacattcaacggctgcggatcagttctttgat
gataaacattcaaaaactcctgatcatgaccaacatcatacaccacaggtggcagcatca
agcccttttggtgtggggcagttcttcgctggtggaggacttgttccaccatatccgcag
atggcacaggttgctggttttatcccacctccaagtggaatctgggcaagtggaataatg
ccttgtcagcagcaacaaaacacagtctttcctaatagctttcccacagacacactgcca
tggcccccacagaaccatcacccgcatcccttccaaatgccaatgccgaatggaatgctg
tttcagcagcaatttgatcctggtcatgcagcatttcctaatgctgtcttatcttctggg
caggcaaatttcttcatgaggcccacatatccaccttggcctgggttgggagctcaaagt
ggcctcaatcaagcagcatttgggatgggtttgcagggccaacatgcacgccccatcata
agtgcaggagagcaaggagctttgtccagcggattgcctatgggacagagttgtgatgtg
caaccacctgctgttactcagggtaaaatccaagcttcccagcaatttaatcagcgagca
tcctttggtcgcgggaagaaaccatttcacagagggggtggtcgctttgcaggtggaaga
ggaggaggacgaggccaacagcaatccaagtga
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