Vitis vinifera (wine grape): 104881085
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Entry
104881085 CDS
T01084
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
vvi
Vitis vinifera (wine grape)
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvi03021
]
104881085
Transcription machinery [BR:
vvi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
104881085
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
104881085
NCBI-ProteinID:
XP_010658170
UniProt:
F6HC30
A0A438E3N3
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Position
13:join(1739171..1739329,1740765..1741589)
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AA seq
327 aa
AA seq
DB search
MEKELLELFEATKKAADAAAVNSGAPSEEERCLDALKQLKDFPVTYQVLVSTQVGKRLRT
LTKHPTKKIQALASDLIDIWKNIVIEETTKNKKNGDLEDKESPKPVTANPENVKATPLLK
VSKAENIKVEKQTSGVKKPSHNIVGPPKLTSISKCNDALRDKVRELLSEALSKVVGEADE
DIMDAVNACDPIRVAVSVESVMFEKWGRSSGAHKLKYRSLMFNIKDAKNPDLRRKVLLGQ
VMPERLLEMGPEEMASDRRQLENQQIKEKALFDCELGAAPKATTDQFKCGRCGQRKTTYY
QLQTRSADEPMTTFVTCVNCNNHWKFC
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagagctccttgagttgttcgaagccacgaaaaaagcggcggacgctgctgcc
gttaacagcggagctccgtctgaagaggaacgatgccttgacgctttgaagcaactcaag
gattttccggtcacctaccaggttctcgtttccactcaggttgggaagcgacttcggacc
ctcacaaaacatcctacgaagaagattcaggctttggcttctgacctaattgatatatgg
aagaacatagttattgaggaaacgactaaaaataagaaaaatggagatttggaggataaa
gaatctccaaaacctgttactgcaaatccagagaatgtcaaggcaactccccttctaaag
gtttcaaaagctgaaaatatcaaggttgagaagcaaacgtctggtgtgaagaagccatcg
cataatattgttggtcccccaaagctgacttctataagcaaatgtaacgatgctttgcgg
gacaaagtccgggaactgctttctgaggctttatccaaagttgttggtgaagctgatgaa
gatattatggatgcagtgaatgcatgtgaccccatccgagttgctgtttcagtggagtct
gtaatgtttgaaaaatggggtcgatccagtggagcccacaagttaaaatatagatctcta
atgtttaatattaaggacgcaaagaacccagatctccggagaaaagtacttcttggacaa
gtgatgcctgagagacttcttgaaatgggcccagaagaaatggcaagcgatcgacgacag
cttgagaaccaacaaatcaaagagaaggctttatttgactgtgagctcggagctgctcca
aaagccacaactgatcaattcaagtgtggtcgatgtgggcaacgcaagactacttactac
cagttgcaaactcggagtgctgatgaacctatgactacctttgtgacgtgcgtaaactgc
aataaccattggaagttctgttaa
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