Vitis vinifera (wine grape): 4025045
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Entry
4025045 CDS
T01084
Symbol
rbcL, ViviCp029
Name
(RefSeq) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
vvi
Vitis vinifera (wine grape)
Pathway
vvi00630
Glyoxylate and dicarboxylate metabolism
vvi00710
Carbon fixation by Calvin cycle
vvi01100
Metabolic pathways
vvi01110
Biosynthesis of secondary metabolites
vvi01200
Carbon metabolism
Module
vvi_M00165
Reductive pentose phosphate cycle (Calvin cycle)
vvi_M00532
Photorespiration
vvi_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
vvi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
4025045 (rbcL)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
4025045 (rbcL)
Enzymes [BR:
vvi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
4025045 (rbcL)
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Gene cluster
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Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
4025045
NCBI-ProteinID:
YP_567084
UniProt:
P56648
C5MTM1
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Position
CP:59436..60863
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AA seq
475 aa
AA seq
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MSPQTETKASVGFKAGVKDYKLTYYTPEYETKPTDILAAFRVTPQPGVPPEEAGAAVAAE
SSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSI
VGNVFGFKALRALRLEDLRIPPAYSKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQAETGEIKGHYL
NATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV
IDRQKNHGMHFRVLAKALRLSGGDHIHAGTVVGKLEGEREITLGFVDLLRDDFVEKDRSR
GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN
RVALEACVQARNEGRDLAREGNEIIRAASKWSPELAAACEVWKEIKFEFPAMDTL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccacaaacagagactaaagcaagtgttggattcaaagccggtgttaaagattac
aaattgacttattatactcctgaatatgagaccaaacctactgatatcttggcagcattc
cgagtaactcctcaacctggagttccacccgaagaagcaggggccgcggtagctgctgaa
tcttctactggtacatggacaactgtgtggactgatggacttaccagccttgatcgttac
aaaggacgatgctaccacatcgagcccgttgctggagaagaaagtcaatttattgcttat
gtagcttaccctttagacctttttgaagaaggctctgttactaacatgtttacttccatt
gtgggtaatgtgtttgggttcaaagctctgcgcgctctacgtctagaggatctgcgaatc
ccccctgcttattctaaaactttccaaggcccgcctcatggcatccaagttgagagagat
aaattgaacaagtatggtcgtcccctattgggatgtactattaaacctaaattggggtta
tccgctaagaactatggtagagcagtttatgaatgtctccgcggtggacttgattttact
aaagatgatgagaacgtgaactcccaaccatttatgcgttggagagaccgtttcttattt
tgtgccgaagccatttttaaatcacaggctgaaacaggtgaaatcaaagggcattacttg
aatgctactgcaggtacatgcgaagaaatgatcaaaagggctgtatttgccagagaattg
ggagttcctatcgtaatgcatgactacttaacagggggattcaccgcaaatactagcttg
gctcattattgccgagataatggcctacttcttcacatccatcgtgcaatgcatgcagtt
attgatagacagaagaatcatggtatgcactttcgtgtactagctaaagccttacgtctg
tctggaggagatcatattcacgccggtaccgtagtaggtaaacttgaaggagaaagagag
atcactttgggctttgttgatttattacgtgatgattttgttgaaaaagaccgaagtcgc
ggtatttatttcactcaagattgggtctctctaccaggtgttctgccagtggcttctggg
ggtattcacgtttggcatatgcctgctctgaccgagatctttggagatgattccgtacta
cagttcggtggaggaactttaggacacccttggggaaatgcaccgggtgccgtagctaat
cgagtagctcttgaagcatgtgtacaagctcgtaatgagggacgtgatcttgctcgtgag
ggtaatgaaattatccgtgcagctagcaaatggagtcctgaactagctgctgcttgtgaa
gtatggaaggaaatcaaatttgaattcccagcaatggatactttgtaa
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