KEGG   Vibrio vulnificus 93U204: VV93_v1c00360
Entry
VV93_v1c00360     CDS       T03294                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
vvl  Vibrio vulnificus 93U204
Brite
KEGG Orthology (KO) [BR:vvl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vvl03400]
    VV93_v1c00360
Enzymes [BR:vvl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     VV93_v1c00360
DNA repair and recombination proteins [BR:vvl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    VV93_v1c00360
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 ResIII DUF4335 PilB3_N SDE2_2C Phage_Mu_Gp27
Other DBs
NCBI-ProteinID: AIL69138
LinkDB
Position
I:42243..44261
AA seq 672 aa
MKLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNVAAVTFTNKAA
REMKERVGQTLGKGESKGLMVSTFHTLGLNIIKREYRHLGLKSGFSLFDDQDQLALLKEL
TEKQLDGDKDLLRQLMSTISNWKNDMLSPEQAVARAQGEQQQLFAFCFEMYQKQMKAYNA
LDFDDLILLPVLLLRGHDEVRQYWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVV
GDDDQSIYSWRGAKPQNLVLLGQDYPNLRLIKLEQNYRSTSRILRAANILIANNPHVYEK
SLFSEIPDGEKLKVLLANNDEHEAERVTGEIIAHKFLNRTDYRDYAILYRGNHQSRLIEK
SLMQNRVPYRLSGGTSFFARAEIKDIMAYLRVLVNPDDDNAFLRIVNTPKREIGPVTLEK
LGSYANMRGKSLFEASFELGLEQHLTGRGLDNLRRFTHWLVAIADQAERGDTVEAVRSLV
RDIHYEDWLYETSASPKAAEMRMKNVSDLYSWIVADLEGDNNDQEEKTLKEVVQRLTLRD
MMERGEEDEDSDAVQLMTLHASKGLEFPYVYLIGTEEGILPHQTSIDEDNVEEERRLMYV
GITRAQRELTFVMCKERRQYGELIKPSQSRFLDELPFDDVEWEQTKKPVTQEERMAKGQA
HIANLRAMFNKK
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgaaactgaatccaagacaagacgaagccgtgaaatacgtatcaggtccctgcctcgtg
cttgcgggtgcgggttcaggcaaaacacgtgtgatcaccaataagattgcctatttggtg
caacagtgtggctacaaagcgcgtaatgttgcggcggtcaccttcaccaataaagccgcg
cgtgagatgaaagaacgtgtggggcaaacactggggaagggggaatcaaaaggcctgatg
gtgtcaacctttcacacgcttggtttgaacatcatcaaacgagagtatcgccatctgggt
ttgaagtcgggcttttccttgtttgacgatcaggatcagcttgcactgcttaaagagctg
actgaaaaacagcttgatggcgataaagatttgctgcgtcagttaatgagcaccatctca
aattggaaaaacgacatgctctcaccagagcaggctgtggcacgtgcgcaaggcgaacag
cagcagttgtttgccttctgttttgagatgtatcagaagcagatgaaagcgtacaacgcc
cttgactttgatgatcttatcttgctgcctgtattactccttcgtgggcatgatgaggtg
cgtcaatactggcaaaaccgtatccgttatcttctggtcgatgagtatcaagacaccaac
accagtcaatatgaactggtgaaactgctggtgggtgagcgcggacgattaaccgtggtt
ggggatgatgaccaatcgatttactcttggcgtggggcgaaaccgcaaaacttagtgttg
ctggggcaagattatcccaacttacgcctgattaaattggagcaaaactaccgctcgacc
agccgtattttgcgtgcggcgaacatcttgattgccaataacccacacgtgtatgaaaag
tcgctcttctcggaaattcccgatggtgaaaaactcaaagtgctgttggccaataatgat
gagcatgaggcggagcgcgtcacgggggaaatcattgcccacaagtttctcaatcgcacc
gactatcgtgactacgccatcctctatcgtggtaaccatcaatcgcgtctcatcgaaaag
tcgctgatgcaaaaccgcgttccttatcgactgtctggtggtacgtctttctttgcgcgc
gcggagatcaaagacatcatggcgtatttgcgagtgttggtgaatccggatgatgacaac
gcatttttgcgcatcgtcaacacacctaagcgtgaaattggccctgtgacgctggagaag
ttaggcagctatgccaacatgcgtggcaaaagtttatttgaagccagctttgaacttggc
cttgagcagcatctgaccggacgtggtctcgataatttgcggcgctttactcattggctg
gtggcgattgccgatcaagcagagaggggagataccgtggaagcggtgcgctcgttggtg
cgagatattcattatgaggattggttgtacgaaacatctgccagcccgaaagccgcagaa
atgcgcatgaaaaacgtctctgatctttactcttggattgtcgctgatttagaaggtgac
aataacgatcaagaagagaaaacgttgaaagaagtggttcaacgtttgacactgcgtgac
atgatggaacgtggtgaagaagatgaagacagtgatgccgtacaactgatgacactgcat
gcgtctaaaggtctggaatttccatatgtgtacctgatcgggactgaagaagggatattg
ccgcaccaaaccagtatcgatgaagataacgtcgaagaagaacgtcgcttaatgtacgtc
ggcattacgcgtgcgcagcgagagctgactttcgtgatgtgtaaagagcgtcgtcaatat
ggggagttgatcaaacccagccaaagtcgcttcctagacgagttgcctttcgatgatgtg
gaatgggaacaaaccaaaaagccagtgacacaggaagaaagaatggccaaaggccaagcg
cacattgccaacttacgtgccatgttcaacaagaagtag

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