Vibrio vulnificus 93U204: VV93_v1c05930
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Entry
VV93_v1c05930 CDS
T03294
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
vvl
Vibrio vulnificus 93U204
Pathway
vvl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VV93_v1c05930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvl03400
]
VV93_v1c05930
Enzymes [BR:
vvl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
VV93_v1c05930
DNA repair and recombination proteins [BR:
vvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
VV93_v1c05930
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
30K_MP_core
Motif
Other DBs
NCBI-ProteinID:
AIL69690
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Position
I:634898..635779
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AA seq
293 aa
AA seq
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MTNSKNRFGNKFIGAHVSAAGGVDNAPLRAREIGANAFALFTKNQRQWVAKPLEEKTISA
FKANCALLGFSPQQILPHDSYLINLGAPEAEKLEKSRLAFIDEMERCQLLGLNLLNFHPG
SHLEKISEKACLSLIAESINLAHQAVPDVVAVIENTAGQGSNLGWRFEHLAEIIEQVEDK
SRVGVCLDTCHTFAAGYDLRTPEACEATFAEFERVVGMHYLRAMHINDSKVKLASKVDRH
HALGKGEIGWDCFEYIAKDSRFDSIPLILETIEPELWPQEIERLRKYHLSSIA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacagcaaaaaccgttttggtaacaaatttattggcgcgcatgtttcagcggcg
ggcggggttgacaatgcacctctgcgggcgcgtgagattggagcaaacgcgtttgctttg
ttcacgaagaatcaacgtcaatgggttgccaagccattagaagagaaaaccatctcggcg
ttcaaagccaattgcgcgttgttgggtttttctccacagcaaattcttccccatgattct
tatcttattaatttaggtgcgccagaagcggagaagctggaaaagtctcgtctcgcgttt
attgatgaaatggagcgatgccagctgctagggttgaacttactcaatttccacccaggc
agccatttggagaagatctcagaaaaagcgtgtttgtctttaatcgcagaatcgatcaac
ttagcgcatcaagcggtacctgatgtggtggcggtgatagaaaacacggccggacaaggt
tccaacttaggttggcgatttgagcaccttgcagaaatcattgagcaggttgaagataag
agtcgagttggggtttgtttggatacttgccacacctttgccgcaggctatgatctgcga
actcctgaggcgtgtgaggcgaccttcgctgagtttgaacgtgtggtcggaatgcactat
ttacgtgcaatgcatattaatgattcaaaagtaaaattagccagtaaggtggataggcac
catgccctagggaaaggtgaaattggttgggactgttttgaatacattgcgaaagatagc
cgttttgattctatcccattgattttagaaactattgaacctgaactttggccgcaagaa
attgagcggttgagaaaatatcatctctcttcaatcgcttag
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