Vibrio vulnificus 93U204: VV93_v1c08430
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Entry
VV93_v1c08430 CDS
T03294
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vvl
Vibrio vulnificus 93U204
Pathway
vvl00550
Peptidoglycan biosynthesis
vvl01100
Metabolic pathways
vvl01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vvl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VV93_v1c08430 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VV93_v1c08430 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vvl01011
]
VV93_v1c08430 (mrdA)
Enzymes [BR:
vvl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VV93_v1c08430 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
vvl01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
VV93_v1c08430 (mrdA)
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GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AIL69937
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All DBs
Position
I:complement(908590..910482)
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AA seq
630 aa
AA seq
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MMRKRRTTIRDYQAEARLFANRALVSFFGIVALMGVLVTNLYNIQVNQYQDYKTRSNDNR
IKVVPIAPNRGLIYDRNGVLLAENRPVFDLEITPEKVKNMDATITQLQTLFEITPEQIER
FHRERKRTRRFKSVPILSQLTEKQVAVFSVNQYRFPGVEVSGTLKRYYPYGEILTHVIGY
VSRINDRDMQRLSDEGKEANYQATRDIGKLGIEKYYEDMLHGTAGYQEVEVNSRGRVIRT
LKFVPPVPGKDIVLNIDIKLQTYVHQLLDGRRGSAIVLDPKDNGILAMVSSPSYDPNAFV
HGISGKGYSDLLNDKNRPLVNRSTLGIYPPASTVKPFIAVSALQEGVVTPNTTRNDPGYW
RIPNSDTRPFRDWLRWGHGRVNLVQSIEESVDTFFYQIAYDLGIDRLSNWMSMFGFGDYT
GIDIFEESKANMPTRDWKMSRHKTPWYKGDTIPVGIGQGYWTATPMQIAKATSVLVNEGN
VTAPHLLRATIENGEAFDSRELSDYVTYPPIQNVPDRYWNLAKEGMRLVNHGKKGTARRS
FTGMSYMTAGKSGTAQVFGLAEDQEYNADELAEHLRDHALFTGFAPFDDPKIIVTIVLEN
AGGGSSNGAPVARRIFDKVLLDKDSDEVKH
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaaacgccgaaccacgatacgagattaccaagccgaagcacggttgtttgcc
aatcgtgctctggtgtcttttttcggtatcgtcgccttaatgggcgttctggtgaccaac
ctatacaacattcaggtcaaccagtatcaagattacaaaacccgctcgaatgacaaccgc
attaaagtggtgcccatcgcacccaatcgtggcttgatttatgatcgcaacggcgtgtta
ttagcggaaaacagaccggtttttgacttggaaatcacaccggaaaaagtcaaaaacatg
gatgccacgattactcagttgcaaactctgtttgaaatcacgccagaacaaatcgaacgt
ttccatcgcgagcgaaaacgcacgcgtcgcttcaaatcggtcccgattctcagtcaactt
acagaaaaacaagtcgcggtattctccgtgaatcaataccgttttcctggcgttgaagtg
tctggcacattgaagcgctactacccttatggcgaaattctcactcatgtgattggctac
gtatcacgcatcaacgaccgagacatgcaacggctgagtgatgaaggtaaagaagccaac
tatcaagcaacacgcgacatcggcaagcttggcattgagaagtattacgaagacatgctc
cacggaacggcaggctaccaagaagtcgaggtcaacagccgtgggcgggtcatccgcacc
ctcaaatttgttccgccagtgcctggcaaagatattgtgttgaacattgatatcaaactg
caaacctatgttcatcagttgctcgacggtagacgaggcagtgcgatcgtactggatccg
aaagacaatggcattttggccatggtatcgagcccaagttatgaccccaatgcgttcgtc
cacggtatttcaggcaaaggttacagcgatcttcttaacgacaaaaaccgcccgttggta
aaccgttcgacgctggggatttacccccccgcttcgaccgtcaaaccctttatcgccgtc
tctgcattgcaagaaggcgtggtaacaccaaacacaaccagaaacgatcctggttattgg
cgcatccccaactccgatacacgtcccttccgtgactggctgcgttggggacatggtcga
gtgaacttggtgcaatccattgaagaatcggtcgataccttcttctaccaaatcgcttac
gacttgggcattgatcgtctttccaattggatgagcatgtttggttttggtgattacacc
ggcatcgatatctttgaagaaagcaaggccaacatgccaactcgcgattggaaaatgtct
cgccataaaacaccttggtacaaaggcgataccattcctgttggtattggtcaaggctac
tggacagccaccccaatgcagatcgcaaaagcaacatcggtcttggtaaacgaggggaac
gtgactgctcctcacctactgcgcgccaccattgaaaatggtgaggcgtttgacagccga
gagttgtcggattacgtcacttatccgccgattcaaaacgtaccagacaggtactggaac
ctcgctaaagaagggatgcgcttggttaaccatggcaagaaaggcaccgcgcgacgctca
tttaccggtatgtcttacatgaccgcaggtaaatcaggcacagcgcaggtttttggcttg
gcagaagaccaagaatacaacgccgatgagctggccgagcacttacgcgaccacgctctc
tttactggctttgcgccatttgacgatcccaaaatcatcgtcaccatagtgttagaaaac
gccggcggcggctcctccaatggtgctcctgtcgcaagacgtatttttgataaagtgtta
ctcgataaagacagtgacgaggtcaaacactga
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