Vibrio vulnificus 93U204: VV93_v1c10280
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Entry
VV93_v1c10280 CDS
T03294
Name
(GenBank) nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
vvl
Vibrio vulnificus 93U204
Brite
KEGG Orthology (KO) [BR:
vvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvl03032
]
VV93_v1c10280
03036 Chromosome and associated proteins [BR:
vvl03036
]
VV93_v1c10280
03400 DNA repair and recombination proteins [BR:
vvl03400
]
VV93_v1c10280
DNA replication proteins [BR:
vvl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VV93_v1c10280
Chromosome and associated proteins [BR:
vvl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
VV93_v1c10280
DNA repair and recombination proteins [BR:
vvl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
VV93_v1c10280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
ACP_syn_III_C
Arteri_nsp7a
VWA_2
GTP_EFTU_D2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AIL70122
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Position
I:1115482..1115775
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AA seq
97 aa
AA seq
DB search
MAQRGITVNKTQLVESIAANADISKASAGRALDAFIEAVSGTLQSGDQVALVGFGTFSVR
TRAARTGRNPKTGEEIQIAEAKVPSFKAGKALKDACN
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaaggggaatcacagtgaacaaaactcaactagtagaatcaatcgctgcaaac
gcagatatctctaaagcgtcagcaggtcgtgctctagatgcattcattgaagcagtaagc
ggtactcttcagtctggtgatcaagtagctctagttggtttcggtactttcagcgtgcgt
actcgcgcagctcgtacaggccgtaaccctaagactggtgaagagatccaaatcgcagaa
gcgaaagtaccatctttcaaagcaggtaaagctcttaaagacgcttgtaactaa
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