Vibrio vulnificus 93U204: VV93_v1c11850
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Entry
VV93_v1c11850 CDS
T03294
Name
(GenBank) 23S rRNA ribosomal pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
vvl
Vibrio vulnificus 93U204
Brite
KEGG Orthology (KO) [BR:
vvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vvl03009
]
VV93_v1c11850
Enzymes [BR:
vvl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
VV93_v1c11850
Ribosome biogenesis [BR:
vvl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VV93_v1c11850
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
DUF3603
TGS
Orexin
Motif
Other DBs
NCBI-ProteinID:
AIL70275
UniProt:
A0AAN1PNX2
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All DBs
Position
I:1293583..1294530
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AA seq
315 aa
AA seq
DB search
MNEIRTKVQIVDIDEDMAGQRIDNFLRNQLKDVPKSMIYRIVRKGEVRVNKKRVKAEYKL
AAGDVVRIPPVTLEKKDPETAPSTKLNKVAELQDLIIYEDDHLLVLNKPSGTAVHGGSGL
KFGAIEALRALRPEARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYFAL
VMGEWKNSCKVVNAPLLKNEVNSIVRVNPNGKPSETRFKVIEKFPQATLVQASPITGRTH
QIRVHTQYSGHPIAWDDRYGDRRFDAYTAQHGLNRLFLHAANIRFTHPATEQPMEINAPM
GEQLEKVVQSLRTSR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaataagaactaaagtccaaatcgtcgatattgatgaagatatggcagggcag
cgtattgataattttctacgcaaccaactgaaagatgttccgaaaagcatgatttatcga
atcgtgcgtaagggagaagtgcgcgtaaacaaaaagcgagttaaggccgagtataaattg
gctgctggtgatgttgttcgcattccaccggtaacacttgagaaaaaagatcctgaaacg
gcaccgagtacgaaactaaacaaagtcgcggaattgcaagatttgatcatttatgaagac
gatcatctgttggtgttaaataagccgtcaggtaccgccgtccacggtggaagtggtctc
aagtttggtgctatcgaagcactacgtgcactgcgaccagaagcgcgctttcttgaacta
gtgcatcgcatcgaccgtgatacctctggtattcttttggtggcaaaaaaacggtcagct
ctgcgtcatttgcaagcgcagtttcgtgagaaaacagtacagaaatactattttgcactg
gtgatgggagagtggaaaaacagctgtaaagtggttaacgccccattactgaaaaacgaa
gtgaacagcattgtgcgcgtcaatccaaacggtaagccatcggaaacgcgtttcaaagtg
attgaaaagtttccacaggcaaccctagtgcaagccagcccaattacggggcgcacacac
caaatccgagtgcacacacaatacagtggtcatccaattgcctgggatgacagatacggt
gatcgacgtttcgatgcttataccgctcagcatggactgaaccgtttgttccttcatgcc
gccaatattcgttttacacatccggcgacagaacaaccaatggaaatcaacgcgccgatg
ggggagcagttggaaaaggtcgttcaatcattgcgaaccagtcgataa
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