Vibrio vulnificus 93U204: VV93_v1c13350
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Entry
VV93_v1c13350 CDS
T03294
Name
(GenBank) DNA or RNA helicase
KO
K19789
DNA repair protein RadD
Organism
vvl
Vibrio vulnificus 93U204
Brite
KEGG Orthology (KO) [BR:
vvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvl03400
]
VV93_v1c13350
DNA repair and recombination proteins [BR:
vvl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
VV93_v1c13350
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Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SLFN-g3_helicase
AAA_22
SWI2_SNF2
DZR
DUF7577
AAA
zf-tcix
SNF2-rel_dom
T1R_D3-like
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AIL70425
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Position
I:complement(1454111..1455808)
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AA seq
565 aa
AA seq
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MHYFRRHSTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAHVKELVEQNHAKYEGYGLQG
SIFSAGLGRKETHHQVVFASVQSVVRNLEQFRNQFSLLVIDECHRVPEEKSSSYQKVISH
LTELNPGIKILGLTATPYRLGIGWIYQYHTRGQVRSEDARFFRDCIFELPIRYLLDEGFL
TPARMMDAPVLAYDFSQLKPANTGRYKEAELDMVIDKAKRATPQIVEQILHLAQTKQGVM
IFAATVRHAQEIHGLLPVDDSAIVIGDTPTPERDEIIRRFKAREIKFLVNVSVLTTGFDA
PHVDLIAILRPTESISLYQQIVGRGLRLSPGKEECLVLDYAGNSYDLYQPEVGDPKPDSN
SEIITIPCPACGFNNNFWGKLDSNGFLLEHFGRRCQGYFTDEESGEREHCGYRFRAKYCG
ECGADNDIAARICHECDATLVDPDKKLKEALNLKDALVFECLEMVLSVHKNPEGKSQLKV
SYLGDNQAQVHEFWPLTTAKQKLLFKNQFVRPHLADKHRPFEEASPTKVVAHQHRFRPPQ
FVIARKSGRFWKMRDKIFEDELQER
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
gtgcattattttcgccgccattccacgccggcagtcattgtgctgccaactggggcgggc
aaaagtttagtgattgccgaattggcgcgattggcgaaaggacgcgtattggtgctggcg
catgtaaaagagctggttgaacaaaatcacgcgaaatatgagggatatggcttacaaggt
tcgattttttcggcaggattgggacgaaaagaaacccaccatcaggtggttttcgcctct
gttcaatcggtcgttcgaaatttagagcagtttcgtaatcaattctctctgctggtgatc
gatgaatgccaccgagttccggaagaaaaaagcagcagctatcaaaaagtcattagccat
ttaacggagctcaatccggggatcaaaatcctcggcctaacggccacgccttatcgctta
ggcatcggctggatttaccagtatcacactcgcggccaagttcgcagcgaagacgcgcga
tttttccgcgattgtatttttgaattacccattcgctatttgctcgatgaaggctttctt
accccagccagaatgatggacgcccccgtcttggcgtatgatttttcacagttgaaaccc
gctaacacaggccgctataaagaagcagagctggatatggtgatcgataaagccaagcgt
gcgacaccgcagatcgttgagcaaatccttcatctcgcccaaaccaagcagggtgtgatg
atttttgcagccacggtgcgtcatgcccaagagatccacggcttattgcccgtagatgac
agcgctatcgtcattggtgacacgccgacaccagaacgagatgagatcatccgtcgcttc
aaagcgcgtgaaatcaagtttttggtcaacgtctcggtgctaacaaccggttttgatgcg
ccccatgttgatctgattgcgattctgcgccctaccgagtccatcagcctttatcaacaa
attgttgggcgtggtttgaggctctcccccggtaaagaagagtgtttagtgctcgattac
gcgggcaacagctatgacctttatcaaccagaagtcggcgatcccaaaccagactcaaac
agtgagatcatcaccattccctgccccgcttgcggctttaataacaacttttggggcaag
ctcgacagcaatggctttttgttagagcactttggccgacgctgccaagggtatttcact
gacgaagagagtggagagcgagagcattgtggttatcgctttcgcgccaaatattgcggt
gaatgtggcgctgataatgacattgcagcgcgcatctgccacgaatgcgatgccacttta
gtggacccagataaaaagctcaaagaggcgttaaatctcaaagatgcgttggtgtttgaa
tgtcttgagatggtgttgagtgtgcataaaaatcctgaaggcaaatcgcagctaaaagtc
agctatcttggcgataatcaagcccaagtgcatgaattttggcctttaaccaccgccaaa
cagaaattgctgtttaagaatcagtttgtgcgacctcacttggcagacaaacatcgtcct
ttcgaagaggcctcgccaaccaaagtggtggctcaccagcatcgattccgaccgccacaa
tttgtcatcgcccgtaaaagtggccgtttttggaagatgcgcgataaaattttcgaagat
gaactgcaagagcgctag
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