KEGG   Vibrio vulnificus 93U204: VV93_v1c13350
Entry
VV93_v1c13350     CDS       T03294                                 
Name
(GenBank) DNA or RNA helicase
  KO
K19789  DNA repair protein RadD
Organism
vvl  Vibrio vulnificus 93U204
Brite
KEGG Orthology (KO) [BR:vvl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vvl03400]
    VV93_v1c13350
DNA repair and recombination proteins [BR:vvl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     VV93_v1c13350
SSDB
Motif
Pfam: ResIII Helicase_C DEAD SLFN-g3_helicase AAA_22 SWI2_SNF2 DZR DUF7577 AAA zf-tcix SNF2-rel_dom T1R_D3-like Zn_ribbon_3
Other DBs
NCBI-ProteinID: AIL70425
LinkDB
Position
I:complement(1454111..1455808)
AA seq 565 aa
MHYFRRHSTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAHVKELVEQNHAKYEGYGLQG
SIFSAGLGRKETHHQVVFASVQSVVRNLEQFRNQFSLLVIDECHRVPEEKSSSYQKVISH
LTELNPGIKILGLTATPYRLGIGWIYQYHTRGQVRSEDARFFRDCIFELPIRYLLDEGFL
TPARMMDAPVLAYDFSQLKPANTGRYKEAELDMVIDKAKRATPQIVEQILHLAQTKQGVM
IFAATVRHAQEIHGLLPVDDSAIVIGDTPTPERDEIIRRFKAREIKFLVNVSVLTTGFDA
PHVDLIAILRPTESISLYQQIVGRGLRLSPGKEECLVLDYAGNSYDLYQPEVGDPKPDSN
SEIITIPCPACGFNNNFWGKLDSNGFLLEHFGRRCQGYFTDEESGEREHCGYRFRAKYCG
ECGADNDIAARICHECDATLVDPDKKLKEALNLKDALVFECLEMVLSVHKNPEGKSQLKV
SYLGDNQAQVHEFWPLTTAKQKLLFKNQFVRPHLADKHRPFEEASPTKVVAHQHRFRPPQ
FVIARKSGRFWKMRDKIFEDELQER
NT seq 1698 nt   +upstreamnt  +downstreamnt
gtgcattattttcgccgccattccacgccggcagtcattgtgctgccaactggggcgggc
aaaagtttagtgattgccgaattggcgcgattggcgaaaggacgcgtattggtgctggcg
catgtaaaagagctggttgaacaaaatcacgcgaaatatgagggatatggcttacaaggt
tcgattttttcggcaggattgggacgaaaagaaacccaccatcaggtggttttcgcctct
gttcaatcggtcgttcgaaatttagagcagtttcgtaatcaattctctctgctggtgatc
gatgaatgccaccgagttccggaagaaaaaagcagcagctatcaaaaagtcattagccat
ttaacggagctcaatccggggatcaaaatcctcggcctaacggccacgccttatcgctta
ggcatcggctggatttaccagtatcacactcgcggccaagttcgcagcgaagacgcgcga
tttttccgcgattgtatttttgaattacccattcgctatttgctcgatgaaggctttctt
accccagccagaatgatggacgcccccgtcttggcgtatgatttttcacagttgaaaccc
gctaacacaggccgctataaagaagcagagctggatatggtgatcgataaagccaagcgt
gcgacaccgcagatcgttgagcaaatccttcatctcgcccaaaccaagcagggtgtgatg
atttttgcagccacggtgcgtcatgcccaagagatccacggcttattgcccgtagatgac
agcgctatcgtcattggtgacacgccgacaccagaacgagatgagatcatccgtcgcttc
aaagcgcgtgaaatcaagtttttggtcaacgtctcggtgctaacaaccggttttgatgcg
ccccatgttgatctgattgcgattctgcgccctaccgagtccatcagcctttatcaacaa
attgttgggcgtggtttgaggctctcccccggtaaagaagagtgtttagtgctcgattac
gcgggcaacagctatgacctttatcaaccagaagtcggcgatcccaaaccagactcaaac
agtgagatcatcaccattccctgccccgcttgcggctttaataacaacttttggggcaag
ctcgacagcaatggctttttgttagagcactttggccgacgctgccaagggtatttcact
gacgaagagagtggagagcgagagcattgtggttatcgctttcgcgccaaatattgcggt
gaatgtggcgctgataatgacattgcagcgcgcatctgccacgaatgcgatgccacttta
gtggacccagataaaaagctcaaagaggcgttaaatctcaaagatgcgttggtgtttgaa
tgtcttgagatggtgttgagtgtgcataaaaatcctgaaggcaaatcgcagctaaaagtc
agctatcttggcgataatcaagcccaagtgcatgaattttggcctttaaccaccgccaaa
cagaaattgctgtttaagaatcagtttgtgcgacctcacttggcagacaaacatcgtcct
ttcgaagaggcctcgccaaccaaagtggtggctcaccagcatcgattccgaccgccacaa
tttgtcatcgcccgtaaaagtggccgtttttggaagatgcgcgataaaattttcgaagat
gaactgcaagagcgctag

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