Vibrio vulnificus 93U204: VV93_v1c18660
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Entry
VV93_v1c18660 CDS
T03294
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vvl
Vibrio vulnificus 93U204
Pathway
vvl03030
DNA replication
vvl03430
Mismatch repair
vvl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VV93_v1c18660 (dnaQ)
03430 Mismatch repair
VV93_v1c18660 (dnaQ)
03440 Homologous recombination
VV93_v1c18660 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvl03032
]
VV93_v1c18660 (dnaQ)
03400 DNA repair and recombination proteins [BR:
vvl03400
]
VV93_v1c18660 (dnaQ)
Enzymes [BR:
vvl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VV93_v1c18660 (dnaQ)
DNA replication proteins [BR:
vvl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VV93_v1c18660 (dnaQ)
DNA repair and recombination proteins [BR:
vvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VV93_v1c18660 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AIL70946
UniProt:
A0AAN1PMM2
LinkDB
All DBs
Position
I:2039289..2040005
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AA seq
238 aa
AA seq
DB search
MISLLKPTKLEWQHKFLQKQQRVADSRLRRFYQSPPVSGETVIGSTPLVALDFETTGLNP
NQHDILSIGLVPFDLHRIRLQQARYWTVKPEDQLHEESVVIHGITHSKVQRAPDLIDVLD
EVLDCLAGKVVVVHYQHIERPFFDSALRKRINEGIEFPLIDTMEIESQWAKQQFGGWLNR
LKGKSLPSVRLAQSRRRYGLPDYSAHHALTDAIATAELFQAQIAHHFSSQTPVSELWR
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgatctctttactcaaacccaccaagcttgaatggcagcacaaattcctgcaaaagcag
cagcgagttgccgattcgcgcttgcgccgattttatcaatcaccgcccgtctcgggtgaa
acagtgataggctcaacgccactggtggccttagactttgaaaccaccggcttaaatccc
aatcaacacgatattctttccattgggctggtaccctttgatttacaccgaatacggctg
caacaagcacgctattggacagtcaaaccggaagatcagttgcatgaagagtccgtcgtc
attcatggtattacgcacagtaaagttcagcgcgcgcccgacttaatcgacgtattggat
gaagtgcttgattgccttgcgggtaaagtggtggtggttcactaccaacatattgagcga
ccattttttgatagcgcgttacgtaagcgaatcaatgaaggcattgagtttcccctgatc
gacaccatggaaattgaaagtcagtgggcaaaacagcaatttggcggctggctgaatcga
ctcaaagggaaatcgctgccttcagtccgcttagcccaaagtcgtcgtcgctatggtcta
cctgattactccgcgcaccacgcactcaccgatgccattgctaccgctgagctgttccaa
gcacagattgcccatcacttttcctcgcaaacgcctgtttcagagctgtggcgatag
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