Vibrio vulnificus 93U204: VV93_v1c23930
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Entry
VV93_v1c23930 CDS
T03294
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vvl
Vibrio vulnificus 93U204
Brite
KEGG Orthology (KO) [BR:
vvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvl03400
]
VV93_v1c23930 (radA)
DNA repair and recombination proteins [BR:
vvl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VV93_v1c23930 (radA)
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
SLFN-g3_helicase
GvpD_P-loop
AAA
RecA_N
Rad51
AAA_14
AAA_22
ABC_tran
nSTAND_NTPase5
nSTAND3
AAA_16
Zeta_toxin
NTPase_1
Viral_helicase1
Zn_ribbon_Thio2
AAA_24
AAA_29
cobW
Zn_ribbon_8
AAA_5
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
AIL71471
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All DBs
Position
I:complement(2625024..2626403)
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AA seq
459 aa
AA seq
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MSKAKRAYVCNDCGADFPRWQGQCNACGSWNSITEVRLAASPSAARNERLSGYAGSATES
KVQVLSEIDLQEVPRFSSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCQLSA
NMNALYVTGEESLQQVAMRASRLGLPKEHLKMLSETNVDKICQVAEQIQPKIMVIDSIQV
MHVSDVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSV
LLDGDADSRFRTLRSHKNRFGAVNELGVFAMTGQGLREVSNPSAIFLSRGEEETSGSSVM
VIWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALIMALLSSFRDRALPKDVVIFGEVGLAGEIRPVPSGQERLNEAFK
HGFKKAIVPLANMPKGGIPGMQIHGVKKLADAISAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagcaaaacgcgcttatgtatgtaatgactgtggagcggattttccgcgttgg
caagggcaatgtaatgcctgtggctcatggaattccattaccgaagtgagattggccgca
tcgccaagcgctgcgagaaacgagcgtttatctggttatgcaggctctgcaacagaatca
aaggttcaggtgttgtctgagattgatttgcaagaagtaccccgtttttccagtggcttc
aaagagcttgatcgcgtcttggggggcggcattgtccccggtgcggcgatcttgatcggt
ggtaaccctggtgcgggtaaatcgacgctgctgttgcaaactatgtgtcaactttccgcc
aacatgaacgcactctatgtcacaggggaagagtcgttgcaacaagttgcgatgcgtgct
tctcgactgggcctaccaaaagagcatttaaaaatgctgtcagaaaccaatgtcgataaa
atttgccaagtggctgagcaaattcagcctaagatcatggttattgactcgattcaggtg
atgcatgtctctgatgttcaatcttctccgggaagtgtggcgcaagttcgcgagtctgcc
accgcgctcactcgttatgcgaagcaaaacaatgtggcggtatttattgttggccacgtg
acaaaagatggcactttggcggggccgaaagtgttggagcacattattgactgttctgtg
ctgctggatggtgatgcggatagtcgttttcgtacccttcgcagccataaaaaccgtttt
ggcgcggtcaatgagctcggggtgtttgccatgacagggcagggattacgtgaggtgagt
aacccttcggcgattttcttgtctcgtggtgaagaagaaacgtcaggcagttctgtgatg
gtgatttgggaaggcacccgacctttgttagtggagatccaagcactggtcgattactca
caactcgccaacccaagacgtgttgccgtgggccttgagcaaaaccgtttgtcgctcctg
ctggcggtgctgcataagcatggtggtttacaaatggccgaccaagacgtgtttgtcaac
gttgttggtggtgtgaaagtaacggaaaccagtgcggatctagcgcttattatggcgcta
ctgtccagctttcgagatagagccttaccaaaagatgtggtgatatttggtgaagtgggc
ttggctggcgaaattcgccctgtccccagtggccaagaacgtttaaatgaagctttcaag
catggctttaagaaagccatcgtgccgttggcgaatatgcctaaaggtgggattcccgga
atgcagatccatggggttaaaaaattagccgatgctatatcagccttcgatgaattatga
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