Vibrio vulnificus 93U204: VV93_v1c24230
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Entry
VV93_v1c24230 CDS
T03294
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vvl
Vibrio vulnificus 93U204
Brite
KEGG Orthology (KO) [BR:
vvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vvl03016
]
VV93_v1c24230 (truB)
Enzymes [BR:
vvl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VV93_v1c24230 (truB)
Transfer RNA biogenesis [BR:
vvl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VV93_v1c24230 (truB)
Prokaryotic type
VV93_v1c24230 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AIL71501
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All DBs
Position
I:complement(2661684..2662628)
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AA seq
314 aa
AA seq
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MARRRKGRPIDGVILLDKPTGMSSNDALQKVKRLYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTDTSDSDGEVVETRPVNVTLETLEACIEKFRGESDQ
VPSMFSALKYQGKPLYEYARKGIEVPRESRKITVYEMTLHRFEGEEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRTGVAKYPYENMVTIEQLNELVDNANRDGVAPREVLDPLL
MPMDTAVEDLPEVNLIADLADMVMHGQAVQVLGAPTEGQLRLTMGEERRFIGVGEMNRDG
KIAPKRLVVFRDEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcgtaaaggtcgcccgattgatggtgttatcttattagataaaccaaca
ggaatgtcatctaacgatgctttgcaaaaagtaaaacgtctttacttcgctgaaaaagcc
ggccatacaggcgcgcttgaccctttggcgacgggtatgttgccaatctgccttggtgaa
gcgacaaagttttctcagttcttgctcgactcagacaaacgctatcgagtgattgccaag
ctaggtgagcgcaccgacacctcagattctgacggtgaagtagtggaaacgcgccctgtc
aacgtgacgcttgagaccctagaagcgtgtattgagaaattccgtggcgagtccgatcaa
gtgccctcgatgttttcagcattgaaatatcaaggtaagcctttatatgaatatgcacgt
aaaggtattgaggtgccacgtgagtctcgtaagataaccgtctatgagatgactcttcac
cgctttgaaggtgaggaagtggaaatggaagtgcattgctcaaaaggtacttacattcgc
acaatcgtcgacgatctaggtgaaatgcttggctgtggtgcccacgtaaccatgctacgt
cgtacaggtgttgcaaaatacccttatgaaaacatggtgaccatagagcagcttaatgaa
ttggttgataacgccaatcgtgatggtgttgcaccacgtgaggtgttggatccactgctg
atgccgatggataccgcagttgaagatttgccagaagtgaatctgatcgcggatctagcc
gatatggtgatgcatggccaagctgttcaagtcttgggggcgcctacagaaggccaactc
agactgaccatgggtgaagaaagacgctttatcggtgtcggtgaaatgaatcgcgatggc
aaaattgcaccaaaacgtttggtggtttttcgcgacgaagagtag
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