Vibrio vulnificus 93U204: VV93_v1c25230
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Entry
VV93_v1c25230 CDS
T03294
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vvl
Vibrio vulnificus 93U204
Brite
KEGG Orthology (KO) [BR:
vvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vvl03016
]
VV93_v1c25230 (truD)
Enzymes [BR:
vvl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
VV93_v1c25230 (truD)
Transfer RNA biogenesis [BR:
vvl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VV93_v1c25230 (truD)
Prokaryotic type
VV93_v1c25230 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AIL71601
LinkDB
All DBs
Position
I:complement(2788233..2789276)
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AA seq
347 aa
AA seq
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MIDTLASLAYLAGKPTAQAKIKAKPEHFQVREDLGFEFTGSGEHLMVRIRKTGENTSFVA
NELAKACGVKSKDVSWAGLKDRHAVTEQWLSVHLPKAETPDFSAFLAQYPSIEILATARH
NKKLRPGDLVGNDFVVTLSEVSDVDDVLKRLETVAKLGVPNYFGNQRFGNNGNNLQEAKR
WGRDNVRSRNQNQRSLYLSAARSWIFNLIVSARLEQSRFDKVLLGDILFKGDEQLLVSAE
NHADLQSQYDAGDLVISGALAGDNALPTQDDALALEQVFLDAEPDLMALIRGNRMRHDRR
AIALKPANLSWQVDGNNIILTFSLDAGSFATSIIRELVQEIAFEREF
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgatagacactttggcttctctggcctatttagcgggtaaaccaaccgcacaagcaaaa
atcaaagcaaaaccagaacattttcaggtaagagaagacttaggttttgagttcactggt
tctggtgagcacttgatggtgcgcattcgaaaaactggcgagaacacctcctttgttgcc
aatgaattggcgaaagcatgtggcgtgaaatcaaaagacgtcagctgggctggcttgaaa
gatcgccacgcggtgacggaacaatggcttagtgtccatttgcctaaagcggaaacaccg
gatttttccgcttttctcgcacaatacccatcgattgaaatcctcgctaccgctcgtcat
aacaagaaattacgtcctggagaccttgttgggaacgattttgttgtgacgctatccgaa
gtctcggatgtggacgatgtgctcaaacgtctagagacggtcgcaaaactcggtgttcca
aattacttcggtaatcagcgttttggtaacaatggcaataacctgcaagaagcaaaacgt
tggggtagagacaatgttcgtagccgcaatcaaaatcaacgtagcctctacttgtctgct
gcgcgttcatggatcttcaatttaattgtctcggcgcgacttgagcaatcacggttcgat
aaggttttactaggcgacatcctgtttaagggggatgaacagctattggtgagtgcagaa
aatcatgcggatctccagtctcaatatgatgctggcgatttggtgatcagtggtgccttg
gctggcgataatgccttgccgactcaagatgacgcgttggcgctagagcaagtgttctta
gatgctgaacccgatcttatggcgctgattcgcggcaatcgcatgagacacgatcgccga
gcgatcgcattgaagccagccaatctcagttggcaagtggatggcaataacatcatcctg
actttctcgctcgatgcaggctcttttgctacgtctattatccgcgagctagtacaagaa
atcgcgtttgaaagagaattctaa
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