Vibrio vulnificus 93U204: VV93_v1c26740
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Entry
VV93_v1c26740 CDS
T03294
Name
(GenBank) regulatory protein CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
vvl
Vibrio vulnificus 93U204
Brite
KEGG Orthology (KO) [BR:
vvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvl03019
]
VV93_v1c26740
Messenger RNA biogenesis [BR:
vvl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VV93_v1c26740
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Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
PriCT_2
Motif
Other DBs
NCBI-ProteinID:
AIL71750
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All DBs
Position
I:complement(2948154..2950151)
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AA seq
665 aa
AA seq
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MRYTPTLKLSTRLVAFVTMIVISAMFILFIGGTLSFKKLGQEYLNHYLAGIVEVLDKEME
DPDAAYSMQRWMPKMLQASNIVEMKLSTDSGVVYRFKDTSPQIDVNRLYEQSYVLQRNPG
YRVEFKATPPYVGFGYSFQALWSITLAVGLIIFCLMRGVKWLKEQLYGSELLEERGRMIL
AGRVEQYAKGDEREWPYTASEALDMLIEELRDARQERSRFDTFIRTQTFLDKLTGTANRV
LFDNKLESALHESGAQGAVLLMRIADWKSVSEENDKQMADEFVIEVGSLISNLVQRFPEV
VFSRYYPSDFALFIPHLGAKDVANLASQCIRQLEKLNPPYPLDKENWCHIGVTMYQEGER
HSQIMDEAETALRSAQLQSNNNWSRFKKWNHIDETRGSVKWRTIFETAMSTENVLVFGQL
SYLLDGQQLNPLHTELTCRIVDPENGIVKASRYMSALKQVGFESQMDRAVIGKVFAHLRA
NSENIGKLSLNLHVTPFANRHYFKWFRDELLQLPSEYRTKLSFEFVESHLVRHLDYMRPV
AKMLSGLGCQLVVGQAGRTIVSTHYLKDLGVDYLKLHRSLTKKIEQRHENQLFVRSMLGA
GAGTKVKVIAVGVETKQEWSTLVELGIHGGQGRYFSVENQWLPPVVATVEEKQTKTARRN
RWRRK
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgaggtataccccgactctcaaactcagtactcgacttgtagccttcgttacaatgatc
gttatcagtgccatgtttatcctctttattggtggcactctctcatttaaaaagcttggt
caggaatatctcaaccactatttggcgggcattgtcgaagtgttggataaagagatggaa
gatcctgatgccgcatattctatgcagcgttggatgccgaaaatgctgcaagcttccaat
atcgtagaaatgaagctttctaccgattctggggtggtctaccgtttcaaggacacctcg
ccgcaaattgacgttaatcgcctttatgaacaaagttatgtgctacagcgtaatcccggg
tatcgcgtcgagttcaaagcgacaccgccttacgttggctttggctattcgtttcaagcg
ttgtggtcgattaccttagcggttggcctgatcattttttgtttaatgcgcggtgtgaaa
tggctgaaagagcagttatatggctcagagctattggaagagcgcggacgcatgattctg
gcaggacgagtggaacaatacgccaaaggtgacgagcgagagtggccttacacggcaagt
gaagcgttagacatgctgattgaagagctgcgcgatgcacgtcaagagcgcagtcgcttt
gatacgtttattcgtacccaaacttttctggataaattgacgggcacggcgaatcgggtg
ttatttgacaataaactggaatcggcgctgcatgagagtggggcgcaaggtgcggtgtta
ttgatgcgcattgcggattggaaaagtgtgtcagaagaaaatgacaaacaaatggccgat
gaatttgttattgaagtgggcagcctcatttccaatttggttcaacgttttcctgaagtg
gtcttctctcgctattacccgtccgacttcgctctctttatccctcatttaggtgccaaa
gacgtggccaatctggcgtcgcagtgcattcgtcagctggagaaactcaatcctccttac
ccactggataaagaaaactggtgtcacattggtgtcactatgtatcaggagggggaacga
cacagccaaattatggatgaagcggaaaccgcactgcgaagtgctcaattacagagcaat
aataactggagtcgatttaagaagtggaatcatattgatgaaacaagaggcagtgtgaag
tggcgtaccatttttgagacagctatgtcgactgaaaatgtgctagtcttcggacaattg
tcttatttattagacgggcagcagttaaatccgttgcatactgagttaacatgtcgaatt
gttgatccagaaaacggcattgtgaaagcctctcgctatatgtctgcgttaaagcaggtt
gggtttgagagtcaaatggaccgcgcggtcatcggcaaagtgtttgctcatttgcgtgca
aattctgagaatatcggcaaattgtcactgaatttacacgtcacgccgtttgccaaccgt
cattatttcaaatggttccgagacgaactgctacagttacctagtgagtatcgaacaaaa
ttgagttttgagtttgttgaaagtcacttagtaaggcatctggattatatgagacctgtg
gcaaaaatgttgtcaggtttggggtgccaactggtggtcgggcaagctggtagaaccatt
gtgagtacgcattatttgaaagatttgggtgtggattacttaaaattacatcgaagtctg
acaaagaaaatagaacaacgccatgaaaaccagttgtttgttcgtagtatgctgggcgcg
ggcgcagggacgaaagtgaaagtcattgcggttggcgttgaaaccaagcaagagtggtca
accttggttgagctaggcatacatggtggacaagggcgctatttctccgttgaaaatcag
tggttaccgccagtcgtggctactgtggaagaaaaacaaacgaaaacggcaagacgcaat
cgctggcgtcgaaaataa
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