Vibrio vulnificus 93U204: VV93_v1c28570
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Entry
VV93_v1c28570 CDS
T03294
Symbol
fis
Name
(GenBank) DNA-binding protein Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
vvl
Vibrio vulnificus 93U204
Pathway
vvl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vvl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VV93_v1c28570 (fis)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vvl03000
]
VV93_v1c28570 (fis)
03036 Chromosome and associated proteins [BR:
vvl03036
]
VV93_v1c28570 (fis)
03400 DNA repair and recombination proteins [BR:
vvl03400
]
VV93_v1c28570 (fis)
Transcription factors [BR:
vvl03000
]
Prokaryotic type
Helix-turn-helix
Other families
VV93_v1c28570 (fis)
Chromosome and associated proteins [BR:
vvl03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
VV93_v1c28570 (fis)
DNA repair and recombination proteins [BR:
vvl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
VV93_v1c28570 (fis)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fis_N
HTH_8
HTH_30
Xre-like-HTH
HetZ
Baseplate_J_C
DUF134
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AIL71929
LinkDB
All DBs
Position
I:3153931..3154227
Genome browser
AA seq
98 aa
AA seq
DB search
MFEQNLTSEALTVTTVTSQDQITQKPLRDSVKASLKNYLAQLNGQEVTELYELVLAEVEQ
PLLDTIMQYTRGNQTRAATMMGINRGTLRKKLKKYGMN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacaaaatctgacttcagaagctttaacagtaactaccgtaacatcacaagat
cagatcacgcaaaagccactacgtgattctgttaaagcgtctcttaaaaactacttggct
caactaaacggtcaagaagtcactgaactttatgaattagttctagctgaagttgaacag
ccactactagataccatcatgcagtacactcgcggtaaccaaactcgcgcagcaaccatg
atgggcatcaaccgcggtactcttcgtaagaaactgaaaaaatacggcatgaactaa
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