Vibrio vulnificus 93U204: VV93_v1c31520
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Entry
VV93_v1c31520 CDS
T03294
Name
(GenBank) pseudouridylate synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
vvl
Vibrio vulnificus 93U204
Brite
KEGG Orthology (KO) [BR:
vvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vvl03009
]
VV93_v1c31520
03016 Transfer RNA biogenesis [BR:
vvl03016
]
VV93_v1c31520
Enzymes [BR:
vvl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
VV93_v1c31520
5.4.99.29 23S rRNA pseudouridine746 synthase
VV93_v1c31520
Ribosome biogenesis [BR:
vvl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VV93_v1c31520
Transfer RNA biogenesis [BR:
vvl03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
VV93_v1c31520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AIL72220
LinkDB
All DBs
Position
II:complement(173892..175589)
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AA seq
565 aa
AA seq
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MHTPDPCFTPFTTAIDGYALPERFTFPFYYTPHPLCVLAAEQLQQHLLTQQEWQHNFGLL
NGEVVSDDESAIGKMFGVLLVENAQGDIGFLSAFSGKIADQNLLPGFVPPVFDMLAEESF
FRRELSEITDINHQVKQLSQSAELAQLRQQIEADRQAYQAQEQAQRQAMIEGRAARKQQR
EQAEATLTGDALKAVLDDLAKQSVAEKNVLKYLKLEWDEKLASEEARLQVLLAQLDTLKE
QRKTLSNALQHKLFAQYRFLNVRGEQSDLNAIFAPTTSPVPPAGSGECAAPKLLQYAFTH
GLKPLAMAEFWWGVSPKSEVRQHKKFYPSCHSKCHPILGHMLQGLNMDPNPLEENWAEDK
ELEIVYQDEAMVVVNKPSGLLSVPGKTITDSAYTRLQALFPDVEGPFVIHRLDMATSGLL
VFALTRRANKSLQKQFISRGVQKRYVALLEGEVPQSQGEITLPMRGDPDDRPRQLVCFEH
GKPAHTDWQLIETRDGRSKLYLYPRTGRTHQLRVHCAHHLGLNMPMVGDGLYGEKANRLH
LHAESLELDHPYSKERMHFQVDAKF
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcacacgccggacccttgctttacccccttcaccaccgctatcgacggctacgccctg
cccgagcgctttaccttcccgttttactacacaccgcatccgttgtgtgtattagcggca
gagcagttgcaacagcatttgctcactcagcaagagtggcagcacaactttggcttgttg
aacggtgaagtggtgagtgacgatgagagcgcgattggcaaaatgtttggcgtgctgctg
gttgaaaatgcacaaggcgacatcggttttttgagcgcattctcaggcaaaattgccgac
caaaatctattgcccggctttgtgccaccggtgtttgacatgctggcagaagagagcttt
ttccgccgcgagttgtcggaaatcaccgacatcaaccatcaagtgaaacagttgtcgcaa
agcgcagagctggcacaacttcgccagcaaattgaggctgaccgccaagcttaccaagcg
caagaacaagcccaacgccaagccatgatcgaagggcgcgccgcacgcaagcagcagcgc
gagcaagcggaagcaacgctcactggcgatgcgctcaaagcggtgttggatgatctcgcc
aaacaaagcgtggccgagaaaaacgtactcaaatacctcaaactggagtgggatgaaaaa
ctcgccagtgaagaggcgcgtttgcaagtgctgctcgctcaactcgatacgctcaaagag
cagcgcaaaaccttatcgaacgccttgcaacacaaattgtttgctcagtatcgcttcctc
aatgtgcgcggggagcagagcgatctcaacgcgattttcgcaccaaccaccagccctgtg
ccgccagcaggctctggcgaatgtgccgcgccaaaactgctgcaatacgcttttacccac
ggcttgaagccactggcaatggcggaattttggtggggtgtgtcgccgaaatcggaagtg
cgccaacacaaaaagttttacccctcctgccacagcaaatgccaccccattttgggccat
atgctgcaagggctgaacatggacccgaacccgctggaagaaaactgggcagaagacaaa
gagctggaaatcgtctatcaagacgaggcgatggtcgttgtcaacaaaccgtctgggctg
ttatcggtgccgggcaaaactattaccgattccgcttatacccgtttgcaagcgctattc
cctgacgtggaagggccgtttgtgattcaccgcctagacatggcgacatcgggattgttg
gtgtttgccctcacccgtcgcgccaacaagagcctgcaaaagcagtttatttctcgtggc
gtgcaaaagcgttatgtggcgctattggaaggtgaagtgccgcaaagccaaggggaaatc
accctgcccatgcgaggcgacccagacgacagaccgcgccaactggtctgttttgaacac
ggaaaacccgcgcataccgattggcagttgattgagactcgcgatggccgcagcaagctt
tacctctacccaagaacggggcgcactcaccaacttcgcgttcattgtgcccatcacctt
ggtttgaacatgccgatggtgggcgatggtttgtatggtgaaaaagccaaccgactgcac
ttgcacgcggaatcgcttgaacttgaccacccttacagcaaagaacgcatgcattttcag
gtggatgccaaattctag
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