Vibrio vulnificus 93U204: VV93_v1c33690
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Entry
VV93_v1c33690 CDS
T03294
Name
(GenBank) DNA-binding HTH domain-containing protein
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
vvl
Vibrio vulnificus 93U204
Pathway
vvl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vvl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VV93_v1c33690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vvl03000
]
VV93_v1c33690
Transcription factors [BR:
vvl03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
VV93_v1c33690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VpsT-like_REC
GerE
Sigma70_r4_2
Sigma70_r4
HTH_40
HTH_30
HTH_23
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AIL72431
LinkDB
All DBs
Position
II:441182..441808
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AA seq
208 aa
AA seq
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MESQNKEVILITEDSLQSSLLKEILEKKLNMVVHLLTPKELDERTTSYSSIKAILVDYSV
VEEDFYSSYLNFIDENFSEVQEVLINCQNNISIEELCIWRSLTGIFYLSDDISTLELGID
RILSGDMWFSRKISQEFISTLRQHSKPISKNVSTKLTKREQQIITLLSLGNSNQQIARKL
FVRENTVKTHLHNIFKKIDVKNRVQALI
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggagagtcaaaacaaggaagtgatattgattacggaagacagtctgcaatcctcactg
ttaaaagaaattcttgagaaaaaactcaatatggtcgttcatttgctcactcctaaagag
ttagatgaacgaacgacgagttattcttcgatcaaggcaattcttgtcgattatagtgtt
gttgaagaggatttttattcttcatatttgaattttatagatgaaaacttttcggaagtc
caagaggttctgattaattgccaaaataatattagtattgaagaattatgtatttggcgt
tctttgactggaatattttatttatctgatgatattagtactttagaactaggaattgac
agaatcctgtcgggtgatatgtggtttagtcgtaaaatatcacaagaatttatttcaact
ttgcgtcagcacagtaaacctatctcaaaaaacgtatctacaaagctgacgaaacgagaa
cagcaaataataaccctcttatcactagggaattcaaatcagcaaattgcacgcaagctt
tttgttagagaaaacacagtgaaaacgcatttacacaacatctttaaaaagattgatgtt
aaaaatagagttcaagctctaatttga
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