Vibrio vulnificus 93U204: VV93_v1c35890
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Entry
VV93_v1c35890 CDS
T03294
Symbol
sbcD
Name
(GenBank) DNA repair exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vvl
Vibrio vulnificus 93U204
Brite
KEGG Orthology (KO) [BR:
vvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvl03400
]
VV93_v1c35890 (sbcD)
DNA repair and recombination proteins [BR:
vvl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VV93_v1c35890 (sbcD)
Archaeal homologous recombinant proteins
VV93_v1c35890 (sbcD)
BRITE hierarchy
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GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Paramyx_P_V_C
Motif
Other DBs
NCBI-ProteinID:
AIL72649
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Position
II:678102..679235
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AA seq
377 aa
AA seq
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MKFIHTSDWHLGRQFHNVSLLDDQRVVLDQLVNYIRNHPVDAVVVAGDIFDRSVPPTAAI
ELLGKTIDEICGELDTPMILIPGNHDGAARLGFGASQMKPSGLHIISQFSQMIEPVVLKS
ERAGDVAFYGMPYSDPEQVRDAFGVPVSNYDEAHRVLVDEIRQHFDPRQRQVLLSHCFVD
GAQSSESERPLSIGGSDRVSYEHFSIFDYVALGHLHQPQKRVEEHIRYSGSLMKYSFSEQ
FQKKGFTLVELDENGFVCAEHIALDAPHDMRVIEGEMNDILEQGKQDPNYQDYLLVRLHD
KHAILNPMEKLRAVYPNVLHLEKPGMLMNVEQGLSQAKLARSEVDMFRDFFAQAQDNPLS
ETQDAAICQLIQQLTKS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcatccatacctcagattggcatctcggacgccagtttcacaatgtttcactc
cttgatgatcaacgcgtcgtgctcgatcagttagttaattatattcgaaatcatcccgtt
gatgccgttgtcgttgctggcgatatttttgatcgctcggtgccacctactgccgccatc
gaactgctcggcaaaacgattgatgaaatttgtggtgaacttgatacaccgatgattctg
attccaggcaaccatgatggtgctgcgcgtttgggctttggtgcttcgcaaatgaaaccc
tcagggctgcatatcattagccagttctcacaaatgatcgaaccggttgtgcttaaaagt
gagagggcgggcgatgtggcgttttatggcatgccttacagcgatcctgaacaagtacgc
gacgcatttggcgtgccggtgagcaattatgatgaggcgcatcgcgtcttggttgatgaa
attcgccagcattttgatcccagacagcgtcaggtgctactgagccactgttttgtcgat
ggggcgcagagcagtgagtcggagcgtccactttccatcggtggatctgaccgcgttagc
tatgagcatttttccatttttgactacgtcgccttagggcacctgcaccaaccacaaaag
cgagtggaagaacacattcgttatagtggttcattgatgaaatacagtttttctgagcag
tttcagaaaaaaggattcacgttagtggagttggatgaaaacggttttgtctgcgcagag
cacattgcgctcgatgcccctcatgacatgcgggtgattgagggcgaaatgaacgatatt
ctcgaacaaggtaagcaagatcccaattatcaggactatttgcttgttcgcttgcacgac
aaacatgccattttaaacccgatggaaaagttacgagcggtctatcccaatgttcttcat
ttagaaaaaccagggatgttaatgaacgtagagcaagggttatcgcaagctaaattggct
cgtagcgaagttgacatgtttcgtgatttctttgcacaagcgcaggacaacccactgagc
gaaacgcaagatgccgcgatttgccagctcattcaacaattgaccaagtcttag
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