Vibrio vulnificus 93U204: VV93_v1c35900
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Entry
VV93_v1c35900 CDS
T03294
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vvl
Vibrio vulnificus 93U204
Brite
KEGG Orthology (KO) [BR:
vvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvl03400
]
VV93_v1c35900
DNA repair and recombination proteins [BR:
vvl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VV93_v1c35900
Archaeal homologous recombinant proteins
VV93_v1c35900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
AAA_16
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AIL72650
LinkDB
All DBs
Position
II:679244..682309
Genome browser
AA seq
1021 aa
AA seq
DB search
MKPLKLTMQAFGPFAEREVIDFTQLGDNPLFLINGPTGSGKTSILDAICFALYGETTGNE
RQGMQMRSDLASIHLATEVTLEFLLHGKRYKVIRLPEQEAAKARGEGTTTKKHTAALYLC
QDDEELITSKTAEVKTRVTELIGLNETQFRQVMVLPQGKFRDLLLASSKDREEIFGQLFQ
TEIYKRIEWALKDKANAISKAKEEFDNQIRGALEVADVSDEQALKEVLADKKTQLMQWQE
TEKHALERYNSAKQSLSVAKALVEDFNKLALAKTNLDAHLAKNDQMLHLAQKPEQARQAQ
QLDAPYRQWKNALNDVHAQQGKIDELNASLNTLLLQSNELEQQCLQAQKNAEQIPQLQQR
TYELETVKSKLVEKAQFEQEIIRLEEDVQKFAHQLKRVQEHKVVMQQELTSAVDAFEKAK
QQAAEIPRLEARESELKRQISDYEQYQNLNKVLQNLLAQTEQKEQLHRQTKQHWLNAQQS
ADSMELSWHNGQAAILAQRLHQGEACPVCGSLEHPQKAQFVGEPVHKQQVEQAREQEKTA
LAQLNQHHQELELHLAQVKQQQKAIEEKATQLGELLNSPLETLQAQALEIHHTLKQLQGL
DLAQQESHVKQLTERCAKGEEMEKELAQQHISSSATLKEKTQQLAKFSQQIAAQFSHVAQ
VEQEITQIKQQTTALQTAKETSQKRFDEIQQTLAARQSEVKAHSEMLLQTQQRSEQNQAT
WLEALSASSFDDEPHYLALRVEPEQIEQWKREIEQHQQQATRLEQSYHDLKERLKDQQAP
ELEQLELLVTTTEQHYQQNKNELDAVRSLVAKLETVQAKIAELHTHNHRLEEEYKVFGTL
YDVASGKTGSRISLHRFVLGVLLDDVLIQASHRLALMSKGRYQLTRKTEGFKGTAGRGLD
LIVEDSYTGKSRDVATLSGGESFMAALSLALGLSDVVQSYSGGIRLETLFIDEGFGSLDP
ESLDLAIQTLVELQQTGRMIGVISHVSELKEQMQQRIDVIPSRVGSSIRLKSLFSANAST
N
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccactcaaacttaccatgcaggcgtttggtccatttgctgaacgtgaagttatt
gattttacccaactgggtgacaacccactgtttctaattaatgggcccacaggttcggga
aaaacctctatcttggatgcgatctgtttcgccctttatggcgaaaccacaggcaatgag
cgccaaggtatgcagatgcgttcagatttggcctctatccatctagccacggaagtgacg
ttagagtttctgctacatggaaaacgctataaggtaattcgcctacctgagcaagaggcg
gcaaaagcgcgcggtgaaggcaccaccaccaaaaaacacactgctgcgctttatctttgc
caagatgacgaagagctgatcaccagcaagacggctgaagtaaaaacgcgagtgacggaa
ttgattggcttgaacgaaacgcagtttcgtcaagttatggtgttgccacagggaaaattc
cgcgatttgctgctggcgagttccaaagatcgtgaagagatttttggccaactgttccaa
accgaaatttacaaacgcattgaatgggcgctaaaagacaaagccaatgcgattagtaaa
gccaaagaagagtttgataaccaaattcgtggggcgctagaggtggcggatgtcagtgat
gagcaggcgctcaaagaggtgcttgcagacaaaaaaacgcaactgatgcagtggcaagag
acagagaaacacgctctcgagcgttacaattcggctaagcaatccctatcggttgccaaa
gctctggtcgaggattttaataaactggctttggccaaaacgaatttagatgcccatttg
gcgaaaaatgatcagatgcttcacttggcgcaaaagccggaacaagcacgacaagctcag
cagcttgatgcaccgtatcgccagtggaaaaacgcactcaatgatgttcatgctcagcaa
ggcaaaattgacgagcttaacgcatcattaaacacactgttgttgcagagtaatgagctg
gaacaacagtgtttgcaggcgcagaaaaatgccgaacaaattcctcagctacaacagcga
acgtatgaattagagacggttaaaagcaagctggtggaaaaagcccagtttgaacaagag
atcattcgtcttgaagaagatgtgcagaaatttgctcatcaattaaaacgcgtgcaagaa
cataaagtcgtgatgcagcaagagctgacgtctgccgttgatgcgtttgaaaaggcaaag
cagcaagcggcagagataccgcgacttgaagcgcgagagagtgagctaaagcgtcagatc
agtgactatgagcaataccaaaaccttaataaagtccttcagaatttactcgcgcaaact
gaacaaaaagagcagttacatcggcaaaccaagcagcattggctcaacgcccaacagtct
gcggatagcatggaactgagttggcataatggccaagctgctattttggctcagcgcctt
catcaaggggaagcttgcccagtttgtggtagcctcgaacacccgcaaaaagcgcagttt
gtcggtgagcctgtgcataaacagcaagtagaacaggcccgtgagcaggaaaaaaccgcg
ctcgcccagctcaatcaacatcaccaagagctggagctgcaccttgcacaagttaagcaa
cagcagaaagcgattgaggaaaaagcaacacaactcggtgagctgcttaacagcccgtta
gaaaccttgcaggcgcaagctcttgaaatccatcacacactcaaacagctgcaagggttg
gatctcgctcagcaagaaagtcatgttaaacaactgaccgagcgctgtgcgaaaggcgag
gagatggaaaaagaactcgctcagcaacatatttctagcagcgcaacgttgaaagaaaaa
acgcaacagttggcgaagttcagccaacaaatagccgcgcaatttagccatgttgcccaa
gttgagcaggaaattacgcagatcaagcaacaaacgacggctttacaaacggcaaaagag
acgagccaaaagcgttttgatgagattcaacaaacgcttgccgcacgtcaaagtgaagtt
aaggcacacagtgagatgttgctgcagactcagcagcgcagcgaacaaaaccaagctaca
tggttggaggcgttgtctgcatcgtcatttgacgatgaaccacactatttggcgttgcgt
gtcgaaccagaacagatcgaacaatggaaacgtgagattgagcaacatcaacagcaggcg
acacgtttagagcagagttatcacgaccttaaagagcgtttgaaagatcagcaagcgccc
gagcttgagcaattagagctgttggtgacaacgacagaacagcattatcaacagaacaaa
aatgagttggatgcggtgcgttcactggtggcgaagcttgagaccgtgcaagcgaagatt
gctgaactgcacacgcataatcatcgccttgaagaagagtacaaggtttttggcacgctc
tacgatgtggcgagcggcaaaacaggcagtcgcattagcttgcaccgttttgtgttaggg
gtgttgctggatgatgtactgattcaagcttcgcatcgtttggcgttaatgagtaaaggt
cgctaccagttaacgcgaaaaaccgaagggtttaagggcactgcgggtcgcgggctcgat
ctgattgtggaagacagctacaccggaaaatcgcgtgatgtcgccacactctctggtggt
gaatcgttcatggccgcactttccctagcactgggtttatcggatgttgttcagtcatac
agtggtggcattcgtttagagactttgtttattgatgaaggctttggtagcttggatcct
gaatcccttgatcttgcgattcaaaccttggtggagttgcagcaaacaggccggatgatc
ggggtgatttcccatgtgtcagagttgaaagagcaaatgcaacagcggattgacgtgata
ccgtcgcgagtgggctcttccattcgtcttaagtccttattttccgctaatgcctcaaca
aattaa
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integrated database retrieval system
