Vibrio vulnificus 93U204: VV93_v1c36450
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Entry
VV93_v1c36450 CDS
T03294
Name
(GenBank) response regulator VieA
KO
K13246
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vvl
Vibrio vulnificus 93U204
Pathway
vvl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vvl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VV93_v1c36450
Enzymes [BR:
vvl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VV93_v1c36450
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Gene cluster
GFIT
Motif
Pfam:
EAL
Response_reg
GerE
Sigma70_r4_2
Terminase_5
Sigma70_r4
DUF4992
Sigma70_ECF
TraI_C
Motif
Other DBs
NCBI-ProteinID:
AIL72705
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Position
II:745501..747267
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AA seq
588 aa
AA seq
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MRILIVEDERIQSTSLKLKLASLNYCDVQVADNGEEALKLCAKQRFSLIFCDIHMPEMDG
ISLLTQLSEQPHRPAIVILSAVEDAVLELTKNMCSLAGFPYVDVLKKPFSIESLYNVINH
YASSKQRTVEPSIQHSLRCEEVEVAFETDQIFNYYQPQYDFATGAMVGVEALVRLKHPEH
GVLAPASFLSVIEQCQWMDRLFWRVLEKAISAISSMSDGLKLSVNISQSNLQQPMCDRVM
ALCQQYNFDPHRLTLELTEDQVYNGNTVSLANLARLRMNGVGLSIDDFGTGYASLSQLGK
LPFNELKIDKGFVFDLVTNYKHQQLTKMCLMLAQSLGLHCVVEGVEDEESWQYLRTLGVD
TCQGYYSSPPLTIAELSEQYAKNQSRSLSQESIEGGICALVIDECSVSSSALTKQLQRAS
SVAQVLIARNLDQAVKTLRDYPVNLVVVDIKFMSDATNYTLLTDIDQRFSGRMILLTEQS
NPDIVLLPELTARSTILSKGSALFDTVQEILAHSKLEKTDFSAQQNKLDQLSERELAVAQ
MLFKGLGNKQIANQLDINQKTVSTYKTRVQTKLGIKSAMELVRFFTLD
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagaatactgattgttgaggatgaacggatacaatccaccagtctcaaattaaaactg
gcgtcactcaattactgtgatgtgcaagtggcagacaatggtgaagaagcgttaaagctt
tgtgcgaagcagcgattttcactgattttctgtgatattcatatgccagagatggatggc
attagtctgctcactcaactcagcgaacaaccccatcggccggccatcgtcattctcagt
gcggtcgaagacgcggtacttgagctgaccaaaaacatgtgcagtctggcgggctttcct
tacgtggatgtgctgaaaaagccttttagcattgagtcgctctataacgtcattaatcac
tatgcgagctcaaaacagcgcacggttgagccgagtatccaacactcgcttcgttgtgaa
gaggtcgaggttgctttcgagaccgatcaaatcttcaactattatcagccgcaatacgat
tttgctacaggggccatggttggggtggaagctctggtcagacttaaacatccggaacat
ggcgtgttggctcccgcttcctttctgtctgtgattgagcagtgccaatggatggatagg
ttattctggcgcgtgttggaaaaggcgatcagtgcgatttccagcatgagcgatggttta
aagctgtcggtcaacatcagccaaagcaatctgcaacagccgatgtgtgaccgcgtgatg
gcgttatgccagcagtataacttcgatccccatcgcttgacgttagagctcacggaagat
caggtttacaacggtaacaccgtttctctggccaatcttgctcggcttcgtatgaacggg
gttggcttatccattgatgattttggcacagggtacgcatcgctcagccagcttggtaag
ttgccatttaatgagctcaaaatagacaaagggtttgtctttgatcttgtcactaactac
aagcatcaacaattgaccaaaatgtgtttgatgttagcccagtcgttagggttgcactgc
gtggtggaaggcgtcgaggacgaagagtcttggcaatatctgcgtacgcttggggtcgat
acgtgtcaaggctattactcttcgccaccactgacgatcgctgagctttctgagcaatat
gccaaaaatcagagtcgtagcctgagccaagagagcattgaaggcgggatttgcgcgttg
gtgattgatgagtgctcggtcagctcttccgcgctcacgaaacaattacaacgtgctagc
agtgtggcgcaagtattgattgctcgtaatctcgaccaagcagtgaaaacgttaagggat
taccctgtcaatttggtggtggttgatatcaagtttatgtctgatgcgacaaattacaca
ttgttgaccgatattgatcagcgctttagtgggcggatgattttactgacagaacaatcg
aatcctgacattgttctgttacctgagctcaccgcacgtagtaccattttgtccaaaggc
agcgccctgttcgataccgttcaagagatcttagcgcacagtaagctcgaaaaaacggat
ttctcagcacagcaaaataaactcgatcaactgtcagaaagagagttggcggtggcgcag
atgctgtttaaagggcttggtaacaagcagatcgcaaatcaattggacatcaatcaaaag
acagtcagcacatacaaaacacgagtacaaacaaagttagggatcaagtctgccatggaa
ctggtgagattctttactctagattga
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