Vibrio vulnificus 93U204: VV93_v1c36570
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Entry
VV93_v1c36570 CDS
T03294
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
vvl
Vibrio vulnificus 93U204
Brite
KEGG Orthology (KO) [BR:
vvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vvl03016
]
VV93_v1c36570
Enzymes [BR:
vvl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
VV93_v1c36570
Transfer RNA biogenesis [BR:
vvl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
VV93_v1c36570
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
DUF2274
TmcA_N
Motif
Other DBs
NCBI-ProteinID:
AIL72713
LinkDB
All DBs
Position
II:complement(759260..761254)
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AA seq
664 aa
AA seq
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MFQDNPLLAQLKQQIQENLPKKEGTIKATEKGFGFLEVDSKTSFFIPPAYMKKCMHGDKV
IAIIRTENEREVAEPQELVEQMLNRFIGRVKMFKGKLNVVPDHPQLKKMSLKAKTKKGLN
PQEFAEGDWVVGHLIRHPLKDDNGFFVEISEKITDADDKIAPWWVTLAENDLPNSEPAGI
DDWQIKDDADLERIDMTHIPFVTIDGESTKDMDDALYAKKNDAGDFELTIAIADPTAYIT
PDDEMDKVARERGFTIYLPGRNIPMLPRDLADELCSLIEGEIRPALCCTVTVSKDGVIGD
DIQFFAANIKSHARLAYDNVSDWLETGNCEKWQPSEEIAAIVRDLYQFSQARAEWREKNA
VVFPDRPDYRFELSEDNDVVAIHADMRRSANRLVEESMITANICAGKTLQAHFGTGVFNC
HAGFKPEKIADVVELVNPEGTLEFTAESIATREGFAALRRWLSKQETTYLDNRIRKFQTY
SEVSNQPLPHYAMGLDIYATWTSPIRKYGDMINHRMLKALILNKEPVQKPDDSVGEELAL
HRKHHKIAERNVADWLYARTLADAPENQTLFTGEIFDINRAGMRIRLLENGAAAFIPGSL
IIDNKERIECNGDLGTVSIDKEVVYKLGDVLEVVLADVNQENRSLVAKPTQVFAELPVVE
ETQN
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccacttttagcccagcttaagcaacaaattcaggaaaatctgcca
aagaaagaaggcacgattaaagcaaccgaaaaaggttttggctttctcgaagtcgatagc
aagacaagtttctttattccaccagcctacatgaagaaatgtatgcacggtgataaggtg
atcgccattatccgcaccgaaaacgaacgcgaagttgccgagccacaagagcttgttgag
cagatgctaaatcgcttcatcggtcgtgtgaaaatgttcaaaggcaaattgaatgttgtt
cctgatcatccgcaactgaagaagatgtctctcaaagccaaaacgaagaaaggtcttaac
cctcaagaatttgctgaaggcgactgggttgtcggccatttgatccgtcacccactaaaa
gatgacaacggtttcttcgtggaaatcagcgaaaaaattaccgatgccgatgacaagatc
gcaccttggtgggtaacgctagcggaaaacgatctgcctaactctgagcctgccggtatc
gacgattggcaaattaaagacgatgcggatcttgaacgtatcgacatgacgcatatccct
tttgtgaccatcgatggtgagtcaacaaaagacatggacgatgcgctttacgcgaagaaa
aacgacgctggcgattttgaattgacgattgccattgccgatccaaccgcttacatcaca
cctgatgatgaaatggacaaggttgcacgtgagcgtggctttaccatttatcttccagga
cgcaatatcccaatgctgcctcgtgaccttgctgatgaactgtgttcgctaatcgaaggt
gaaatccgccctgccctttgctgcacagtgaccgtcagtaaagacggcgtgattggcgat
gatatccagttctttgcggcaaacatcaagtcgcacgcccgtttggcgtatgacaatgtc
tccgactggctcgaaacaggcaactgtgaaaaatggcaaccaagcgaagaaattgctgcc
atcgtgcgtgacctataccagttctcgcaagctcgtgctgaatggcgagagaagaatgct
gtagtcttcccagatcgtccagattaccgttttgaactgagtgaagataacgatgtcgtt
gcgattcacgcagacatgcgccgcagcgcaaaccgcttggttgaagagtcgatgatcaca
gccaacatttgcgcgggtaaaacgctgcaagcccatttcggcactggcgtatttaactgc
catgcaggcttcaaaccagagaagattgccgatgtagtggagctggttaacccagaaggt
acgttggagttcacggctgagtcgattgccactcgtgagggttttgctgcactacgccgc
tggttaagcaaacaagaaacgacttatcttgataaccgcattcgcaaattccaaacctac
agtgaagtgagcaaccagcctttgccacactatgcgatgggccttgatatctacgcaact
tggacgtctccaattcgtaaatatggcgatatgatcaaccatcgtatgcttaaggcttta
attctcaacaaagagcctgtgcaaaaaccggatgatagtgtcggcgaagagcttgctcta
caccgcaaacatcacaagattgcagaacgtaatgttgcagactggttgtatgcacgcact
ctagcagacgctccagaaaatcaaacgctgtttaccggtgaaatcttcgatattaaccgt
gctggtatgcgcatccgtttacttgaaaatggcgctgctgcattcatccctggttctctt
attattgataataaagaaagaattgagtgcaatggtgacctaggtactgtttctatcgat
aaagaagtggtatacaaactgggagacgttcttgaagtcgtgttagctgacgttaaccag
gagaacagaagcctggttgcgaaacctacccaagtattcgctgaattacccgtggtagaa
gaaactcagaattaa
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