Vibrio vulnificus 93U204: VV93_v1c36920
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Entry
VV93_v1c36920 CDS
T03294
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vvl
Vibrio vulnificus 93U204
Pathway
vvl00260
Glycine, serine and threonine metabolism
vvl00460
Cyanoamino acid metabolism
vvl00630
Glyoxylate and dicarboxylate metabolism
vvl00670
One carbon pool by folate
vvl00680
Methane metabolism
vvl01100
Metabolic pathways
vvl01110
Biosynthesis of secondary metabolites
vvl01120
Microbial metabolism in diverse environments
vvl01200
Carbon metabolism
vvl01230
Biosynthesis of amino acids
vvl01240
Biosynthesis of cofactors
vvl04981
Folate transport and metabolism
Module
vvl_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vvl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VV93_v1c36920
09102 Energy metabolism
00680 Methane metabolism
VV93_v1c36920
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VV93_v1c36920
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VV93_v1c36920
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VV93_v1c36920
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VV93_v1c36920
Enzymes [BR:
vvl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VV93_v1c36920
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AIL72748
LinkDB
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Position
II:complement(804097..805392)
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AA seq
431 aa
AA seq
DB search
MNSHYQNHSLENFFSTNLSATDDAVFAGIQAEFTRQNEQIELIASENIVSKAVMQAQGTC
LTNKYAEGYPGRRYYGGCEHVDTVEAIAIERAKKLFNCEYANVQPHSGAQANGAVKLALL
QPGDTIMGMSLDAGGHLTHGARPALSGKWFNAVQYGVDKETLEINYDDVRALAVEHKPKM
IIAGGSAIPRVIDFAKFREIADEVGAILMVDMAHIAGLIATGAHPSPLPHAHVVTTTTHK
TLRGPRGGMILTNYEEIIKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFKTYIDSV
INNAKVLAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNKAEEALERAGITCNKNGIPF
DTEKPMITSGVRLGTPAGTSRGFGAEEFKLIGHWIGDVLDGLVENPEGNAEVEQRVRKEV
KALCSRFPLYQ
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtcattaccaaaatcacagcttggaaaactttttctcgactaacttgtctgca
acggatgatgccgtttttgctggtattcaagccgaatttacacgtcaaaatgaacaaatc
gaattgatcgcttctgagaacatcgtgtctaaagcggtcatgcaagcgcaaggcacctgc
ctcactaataaatacgcagaaggttacccaggtcgtcgttactacggtggttgtgaacac
gttgataccgtggaagccattgctatcgaacgcgcgaaaaaactttttaattgcgaatac
gcaaacgttcaaccacactctggcgctcaagccaacggcgcggtgaaactggcgctattg
caacctggcgacaccattatgggcatgtcgctcgatgcaggcggccacttaactcacggt
gcgcgacctgctctttcgggcaaatggtttaacgccgttcaatacggtgttgataaagag
acgctcgaaatcaactacgatgatgttcgcgcactggcggtagaacacaaaccaaaaatg
attattgcgggtggcagcgcgattcctcgtgtgattgattttgccaagttccgtgaaatc
gctgacgaagttggcgcgattttgatggtcgatatggcgcacatcgcgggtttgatcgcc
acaggcgcacaccctagcccactgcctcatgcacacgtggtgaccaccaccacacacaaa
acgctacgcggcccacgcggcggcatgatcctcaccaattacgaagaaatcattaagaaa
atcaactctgcggtattccctggcctacaaggaggcccgctgatgcacgtgattgcagcg
aaagcagtagcgtttggcgaagcactcggccctgagttcaaaacttatatcgattcggtg
atcaataacgcaaaagttcttgctgaagtgttgcaaactcgcggttgtgacattgtgact
ggcggaacggacacgcacctaatgctggttgatcttcgtcctaagggattgaaaggtaac
aaagcagaagaagcactagagcgtgcggggatcacatgtaacaaaaatggcatcccattc
gacacagaaaaacctatgattacatcgggtgttcgtttgggcacgccagcgggtacaagc
cgaggctttggcgcagaagaattcaaattaataggtcactggattggtgatgttctcgac
gggttagttgaaaacccagagggcaacgcggaagtagagcaacgcgtgcgtaaagaagta
aaagcactctgttcacgctttccactttaccagtaa
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