Vibrio vulnificus 93U204: VV93_v1c42890
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Entry
VV93_v1c42890 CDS
T03294
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
vvl
Vibrio vulnificus 93U204
Pathway
vvl00040
Pentose and glucuronate interconversions
vvl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vvl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
VV93_v1c42890
Enzymes [BR:
vvl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
VV93_v1c42890
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Motif
Pfam:
Pectate_lyase22
Tricorn_N
Tricorn_2nd
Methyltransf_21
Motif
Other DBs
NCBI-ProteinID:
AIL73340
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Position
II:complement(1490197..1491363)
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AA seq
388 aa
AA seq
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MAKGKIITLNFETFVDSDTQVKVTRLTPTDVICHRNYFYQKCFTQDGQKLLFAGDFDGNR
NYYLLDLNTQQAVQLTEGKGDNTFGGFISSDDKSFFYVKNELNLMKVDLETLEETVIYTV
DEEWKGYGTWVANSECTKLVGIEILKRDWQPLTSWEKFAEFYHTNPRCRLIKVDIESGEL
EVIHQENAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNLRKIKSHAPGESC
THEFWIPDGSAMAYVSYFKGQTERVIYKANPDTLENEEVMVMPPCSHLMSNFDGSLMVGD
GCDAPVDVADASGYSIENDPFLYVLNTNKKTYAKLAKHSSSWKVLDGDRQITHPHPSFTP
NDEGVLFTSDFEGVPAIYIADVPAELKH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaggcaaaattatcactcttaacttcgaaactttcgtagacagtgatacgcag
gtgaaagtaacccgtttaacaccaacggatgttatctgtcaccgcaattacttttaccag
aagtgctttactcaggatggacaaaagcttctttttgcaggtgattttgatggaaatcgc
aactattacctgcttgatctcaatactcagcaagcagtccaactgacagaaggtaaaggg
gataatacctttggtggtttcatttctagcgatgataaatcgttcttctacgtgaaaaat
gaactgaacctaatgaaagtggatctcgaaacccttgaagagacagtcatttataccgta
gacgaagagtggaaagggtatggcacttgggtggcgaactcagagtgcaccaaattggtg
ggcattgaaattcttaaacgtgattggcaaccactcacgtcgtgggagaaattcgccgag
ttttatcacaccaacccaaggtgccgtttgatcaaagtggatatagaaagcggtgaattg
gaggtgatccaccaagagaacgcgtggcttggtcaccccatttaccgtccatttgatgac
tcaaccgttggtttttgtcatgaaggcccgcacgatttagtcgacgcgcgcatgtggctg
gtgaacgaagatggttcgaaccttcgcaagatcaaatcgcatgcgccgggcgaatcgtgc
acgcatgaattctggatccctgatggcagcgcaatggcttatgtgtcttacttcaagggg
caaacagagcgtgtgatctacaaagccaacccagacacattagagaatgaagaagtgatg
gtgatgccaccttgctcgcacctgatgagtaacttcgatggttctctgatggtcggcgat
ggttgcgatgcaccagtcgatgtcgccgatgctagtggctacagcatcgagaacgacccg
ttcctatatgtgctcaacaccaacaagaaaacctacgcgaagctggcaaaacacagctcg
tcttggaaagtgctggatggtgaccgtcaaattacccatccacacccttcattcacacct
aacgatgaaggggtgctttttaccagtgacttcgaaggggttcccgcgatttacattgct
gacgtccctgctgaacttaagcactaa
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