Vibrio vulnificus MO6-24/O: VVMO6_00301
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Entry
VVMO6_00301 CDS
T01415
Name
(GenBank) helicase PriA essential for OriC / DnaA-independent DNA replication
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vvm
Vibrio vulnificus MO6-24/O
Pathway
vvm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VVMO6_00301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvm03400
]
VVMO6_00301
Enzymes [BR:
vvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VVMO6_00301
DNA repair and recombination proteins [BR:
vvm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VVMO6_00301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
PriA-like_WH
AAA_19
TrwB_AAD_bind
cobW
AAA_16
Zn_ribbon_6
Zot
Motif
Other DBs
NCBI-ProteinID:
ADV85323
LinkDB
All DBs
Position
I:complement(324446..326650)
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AA seq
734 aa
AA seq
DB search
MRPSIARVALPVPLDKQFDYLVPGHLFPIIGGRVSVPFGRQTLIGIVTALVQESDFPREQ
LKPIKAVLDHRPIWPDSVYSLLLWCSQFYQYPLGETLHNALPAALRKGKAADFATLQEWQ
LTELGKNQLMQGLNSRAIKQAKVLNMLANGPLPHQAFLDEEVASTTLRTLEEKGWISCEE
KTPQLARWGNPIEHPVDKPKLNQEQAIAIATVNSQTGFACYLLEGVTGSGKTEVYLNLIK
PILEQGKQALVLVPEIGLTPQTINRFRQRFDVPVAVIHSGLNDTERLNAWLSARDKAAGI
VIGTRSALLIPFAQLGIIIVDEEHDASYKQQDSLRYHARDVAVMRAAKEGIPIVLGSATP
ALETLHNALTGKYHHLSLTQRAGVAVPTTNKVLDVKGLYLESGLSAPLIAEMRRHLKAGN
QVMLFLNRRGFSPALMCHECGWIAECKRCDAYYTYHQYSNEIRCHHCGSQQPIIHQCQGC
GSTQLVTVGVGTEQLENQLTALFPDYKAIRIDRDSTRRKGSLESALEAIRKGEYQILIGT
QMLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVILQTH
HPEHTLLKALLTKDYRHFAQSALEERKIAQLPPFSFLTLFRAEANHSEIVETFLRQVRMT
LESHPLFDHTCLVLGPTPAPLAKRAGKYRWQLLLQTQHRSLMQKILSSTKPAIDLLPDAK
KVRWNLDIEPQDLS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccatccattgctcgtgttgcgctgccagtgccactcgataaacaatttgattat
ctcgttcctggacacctttttccgatcattggtggtcgcgtgagtgtgccgtttggacga
caaaccttgattggcattgtcaccgctttggttcaagaatcagactttccacgcgagcaa
cttaagcccattaaagcggtgttggatcatcgtcctatttggcccgattccgtctacagt
ttattactttggtgtagccagttttaccaatatcctcttggtgaaacactgcataacgcc
ctccccgccgcactaagaaaaggcaaagcggctgactttgctactctgcaagaatggcaa
ctgaccgagttaggcaaaaaccagttgatgcaagggttaaacagtcgtgcgataaagcag
gctaaagtattgaatatgcttgctaatggccctctgcctcaccaagcctttttggatgag
gaagtggcatccacaaccttacgcaccttggaagaaaaaggctggatcagctgtgaagaa
aaaacaccacagttggctcgctggggtaacccgattgaacatcccgtcgataagccgaaa
ctcaaccaagagcaagccattgccattgcaactgtgaatagccaaactggctttgcttgc
tacttacttgaaggggtcacgggatctgggaaaaccgaggtttacctcaacctcatcaag
ccaatcttggaacaagggaaacaagcactggtgctggtccctgaaattggcctaacacct
caaaccatcaatcgttttcgtcaacggtttgatgtgccagtcgccgtcatccattctggt
cttaatgatactgaacgtctcaacgcttggctttccgcacgagataaagcggcgggcatt
gtcattggtacacgctctgcactactgatcccatttgctcaattggggatcatcattgtc
gatgaagagcacgacgcttcgtacaaacagcaagatagcttgcgttaccatgctcgcgat
gtggctgtgatgcgagcggcaaaagaaggcattccaattgttctcggttcagccacgccc
gcgttagaaaccttacacaacgcacttacgggcaaatatcatcatctctcgctaacccaa
cgagcaggagtggccgtgccaaccaccaataaagtgctggatgtcaaagggctctatctg
gaaagcggcctatcagcgccactcattgctgaaatgcgtcgtcatttaaaagcgggcaat
caggtgatgctgtttctcaaccgtcgaggcttctcccctgcgttaatgtgtcatgaatgt
ggttggattgccgaatgcaaacgctgcgatgcctattacacttatcaccagtacagcaat
gaaatccgctgtcaccactgtggttctcaacaacctattatccatcaatgccaaggttgt
ggttcaacacaactggtgacggttggtgtcggcactgagcaactggaaaaccagttgacg
gccctgtttcccgattacaaagcgattcgcatcgaccgcgatagtacacgacgcaaaggc
agtctcgaaagcgctttagaagccattcgcaaaggggaataccaaattttaattggcacg
caaatgctggctaaaggccatcacttcccagacgtgacattagtggcactattagatgtc
gatggttctctttacagcagcgattttcgcgcctctgaacgattagctcagttgtttatt
caagtggccggacgagcagggcgtgctagcaaacctggcgaagtgatattacaaacccac
catccagaacacaccttgctcaaagctctgttgaccaaggattaccggcattttgcgcag
tctgcactggaagaacggaaaattgcccaacttcccccgtttagttttctaacgctattt
cgcgcagaagccaatcacagcgaaatcgtcgaaacattcttacgtcaagtgcgtatgact
ctcgagtctcatcccttgtttgatcacacttgtctcgtgctcggtccaacacccgctcca
ctggccaaacgtgcgggcaaataccgctggcagcttctgcttcaaactcaacatcgttcc
ttgatgcagaaaatactctcgagcacgaaacctgctatcgatttgttaccagatgcgaaa
aaagtacgttggaatttggatattgagccgcaggatctgagttag
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