Vibrio vulnificus MO6-24/O: VVMO6_00497
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Entry
VVMO6_00497 CDS
T01415
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
vvm
Vibrio vulnificus MO6-24/O
Pathway
vvm05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vvm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VVMO6_00497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvm03021
]
VVMO6_00497
Transcription machinery [BR:
vvm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VVMO6_00497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ADV85519
LinkDB
All DBs
Position
I:551746..552738
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AA seq
330 aa
AA seq
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MSISNTVTKVKDFDVNQMDDDFNDDIEINEKEDLTEEKVKLREEFDASNKSLDATQLYLG
EIGFSPLLTAEEEVLYARRALRGDEAARKRMIESNLRLVVKISRRYSNRGLALLDLIEEG
NLGLIRAVEKFDPERGFRFSTYATWWIRQTIERALMNQTRTIRLPIHVVKELNIYLRTAR
ELSQKLDHEPTAEEIAAQLDIPVDDVSKMLRLNERISSVDTPIGGDGEKALLDIIPDANN
SDPEVSTQDEDMRVSLIHWLEELNPKQKEVLARRFGLLGYEPSTLEEVGQEIGLTRERVR
QIQVEGLRRLREVLIKQGLNMENLFDIDMD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcagcaacacagtcaccaaagttaaagatttcgatgttaatcagatggatgat
gattttaacgacgatatcgagattaatgaaaaagaagatcttaccgaagaaaaagtcaaa
cttcgcgaggagtttgatgccagcaacaagagcttagacgcgacacagctttatctagga
gaaattggtttttctccactattaaccgcagaagaagaagtgctttatgctcgacgtgca
ttacgaggcgatgaagccgcacgtaaacgtatgattgaaagtaacttacgtctagtggtt
aagatttcccgccgttacagtaatcgcggtcttgcactgctagatttgattgaagagggt
aaccttggtttgatccgtgcggtagagaaattcgatccagagcgtggtttccgcttctcg
acttacgcaacatggtggattcgccaaaccatcgaacgtgctttaatgaatcagactcga
accatccgtttacctatccatgttgttaaagagctgaacatttatctacgtacggcgcgt
gagctttctcaaaaactcgatcatgagccaaccgctgaagagatcgctgcgcaactggat
attccggttgacgatgtgagcaaaatgctgcgtttgaacgagcgcattagttctgtcgat
acgccgattggtggagatggagagaaggcgttattagatattattccggatgcaaacaac
tctgacccagaggtttcaacgcaagatgaagacatgcgtgtttccttgattcattggttg
gaagagctcaatccgaaacaaaaagaagtgttggcacgtcgctttggtttgttgggttat
gagccttcaacgctggaagaggttgggcaagagattggtttaactcgcgagcgagtgcgc
cagattcaggttgaagggttacgtcgcctccgtgaagttctgatcaaacaaggtctgaat
atggaaaatttgtttgatatcgatatggattga
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