Vibrio vulnificus MO6-24/O: VVMO6_00611
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Entry
VVMO6_00611 CDS
T01415
Name
(GenBank) C-di-GMP phosphodiesterase A-related protein
KO
K20965
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vvm
Vibrio vulnificus MO6-24/O
Pathway
vvm05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vvm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VVMO6_00611
Enzymes [BR:
vvm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VVMO6_00611
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS_8
PAS
PAS_9
Motif
Other DBs
NCBI-ProteinID:
ADV85633
LinkDB
All DBs
Position
I:complement(690888..692927)
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AA seq
679 aa
AA seq
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MPSKQMHHWFNKLTSNSPFFFAILDKQHNYCLVNERYCDVAGLAQEELIGMNDAQILGDN
FYQKLKPYYDRALLGESIEAEITLDETDLETSLHFSLSPVEDGEQISHLLFQAIDTSEKH
ILVKSLEESETKFSRLTQLLPDGLLLVEEDTILSANPAAARLLGFNSQHDLLGEELSRLF
MDEKSKMVFSHKLCSLLSEKAFVCMTSARCGFERRVQLHADFTTVLGNQSQIILIQDADE
TPKHLSVKNSDDIHIDSLTKLYNRFGFTKRLEQLIKSQTPLLLFYLDIDNFKNINDSLGH
HIGDKVILEVAARLKRLLPQHSVIGHLGGDEFGVILPEPENNRMAELLSERIISLINQPF
DLHHFSKRLACSIGSVRYPEDGQDARVLLQNADTAMYEAKDRGRNRLIKFNDQMNKEARM
RLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPAAFIPVAEK
AGLIEHLGRVVMRDVFNTVKRWKLQGILPGRVAINLSPEQFGNPQLIDFMEKLLRTTELD
PNCITFELTESAVMSDSDHTIQMLNAIKKLGFSLSIDDFGTGYSSLAYLARFPIDELKID
RAFINDIDVLPKQVTVIENIINLGKSLNLTVVAEGVETHQQAALLSNLRCHSIQGFHFHR
PQPKHEIEELFAQNRRHKN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgccttccaagcaaatgcaccattggtttaataaactgacttctaatagcccttttttc
ttcgctattcttgataagcaacataactattgcttggtgaatgaacgttattgcgacgtt
gcggggttagctcaggaagagctaatagggatgaatgatgcacaaattttaggtgacaac
ttttaccaaaagctaaagccttactacgaccgagctctgctcggtgaaagtattgaggcc
gaaatcaccctcgatgaaaccgatcttgaaaccagtttgcattttagtttgtcccctgtg
gaagatggtgaacagatttctcaccttctttttcaagcgattgatacctctgaaaaacac
attctcgtcaaatccctagaagagtcagaaaccaagttttctcgtttaacgcaactactg
cccgatggtttactgctggtggaagaagacaccattctctcagcaaaccccgctgcggct
aggctgcttggtttcaattcgcagcatgacttgcttggcgaagagctcagtcgattattt
atggatgagaagagcaagatggtgtttagccataaactctgctcactgctttccgaaaaa
gcgtttgtctgtatgaccagtgcacgttgtggctttgagcgccgcgttcagttgcatgca
gatttcaccaccgtgctgggcaaccaatctcaaatcatcttgatccaagacgctgatgaa
acgccaaaacatctttcggtgaaaaacagcgatgatattcatatcgattccctgacgaag
ctctacaaccgcttcggttttaccaaacgtctggagcagttgattaagagccaaaccccc
ttgttgttgttttatctcgatatcgataacttcaaaaacatcaatgactcgctgggccac
cacattggtgacaaagtgattcttgaagtggcagctcgtctgaaacgactgttgccacaa
cactcggtgattggtcatctcgggggcgatgagtttggcgtcatcttgcctgagccggaa
aacaaccgcatggccgagttgctctctgagcgcatcatctccttaattaatcagccattt
gatttacaccatttcagcaagcgccttgcctgttctatcggcagtgttcgttatcctgaa
gatggccaagatgcacgtgtgctactgcaaaatgccgataccgcgatgtacgaagccaaa
gatcgcggccgtaaccgtctcattaagtttaatgaccagatgaacaaagaagcgcgtatg
cgcctttggttggagatcgaactgcaaaaagcgctacagcaaaatggccttgaagtgtgg
tatcaaccgaaagtcaatgcgcgtgacttcagcattaatggcgccgaagcgttagtacgc
tggaagcaccctgtcgaaggatacattagccctgcggccttcattcctgtcgctgaaaaa
gcaggcctgattgagcacttaggtcgtgtggtcatgcgtgatgtcttcaacacggtcaaa
cgctggaaactccaaggaattctgcctggtcgcgttgcgattaacttatcaccagagcaa
tttggcaaccctcagttgatcgactttatggaaaagctcctgagaaccacggagttagac
cctaactgcatcactttcgagctgactgaaagtgcggtaatgagtgacagtgaccacact
attcagatgctcaacgcgattaagaaactgggcttctcactctccatcgatgactttggt
accggttattcctcactggcgtatttagcccgcttcccgattgatgagctgaagatcgac
cgcgcgtttatcaatgacattgacgttttaccgaagcaggtcacggtgattgaaaacatc
attaatctcggcaaatctctcaatctcaccgtggtggccgaaggggtagaaactcatcag
caagcggcactcctgtcgaatttgcgctgtcactcgatccaggggttccatttccatcgc
cctcagcctaaacatgagatagaagaactgtttgcacaaaatcgtcgccataaaaactga
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