Vibrio vulnificus MO6-24/O: VVMO6_00686
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Entry
VVMO6_00686 CDS
T01415
Name
(GenBank) exodeoxyribonuclease V gamma chain RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
vvm
Vibrio vulnificus MO6-24/O
Pathway
vvm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VVMO6_00686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvm03400
]
VVMO6_00686
Enzymes [BR:
vvm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
VVMO6_00686
DNA repair and recombination proteins [BR:
vvm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VVMO6_00686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ADV85708
LinkDB
All DBs
Position
I:777130..780618
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AA seq
1162 aa
AA seq
DB search
MFTVYHSNQVDVLKSLLVELIRLNPLQNPFDKEQILVQSPGMSQWLKMELAKEFGVAANI
EFPLPATFIWDMFTHVLADVPKRSAFNKEAMTWKLMHLLPQQLALAEFSPLARYLQDDEE
GAKLYQLSEKIADIFDGYLVYRPEWIRDWEAGKAVAEIGDEHPWQPMLWQALYDHTVALG
QSPYHRANLYEHFIDSLENYTGQFERLPQRLFVFGITSLPPRYMDALKALGQHIDVHLMF
TNPCRYYWGEVRDRKFLARLAAKQRQHLVWQQDHSQLQGQSEQLKGSIEDNLADELHTEV
VGNSLLASMGKLGRDNMYLLSQLESHEIEAFVDIEPDSLLHQLQADILNLEEHQDDDHIE
SSHHKPLIEANDRSLSLHVCHSPMREVEVLHDQLLAMFDADPTLKPRDIIVMVADINAYS
PAIQAVFGNAPGERFIPYSISDRTADQESPILNAFLTLVNLPQMRCLASELLELLETPAI
LQKFSLSETEFLQAKQWVEASGIRWGLDAQTGCEFDLPQTRQNTWQFGIQRMLLGYAMPE
SAGLFQSGEEWLAPYNEVQGMGAELAGKLSYFIEKVRCYRHTLAQAQNIDAWRQQLHGVL
ADFFAVDLEGEVALKSIRDTLGQLKEQLSDAAFEAELSPSVIRQYLLNKLSGSRVSQRFL
AGQVNFCTLMPMRSIPFRTVCLLGMNDGVYPRSVAPEGFDLIHGRARAGDRSRRDDDRYL
FLEALLSAQQSVYISYVGRSVQDNTEKVPSVLVAELMEYCQQNYCLVGDEHLGVDESGAH
LLKAISCEHPMVPFSPKAFLGEPPSNAKSYAKEWIPAAQQQSEGQVPSQQSAPFYQALDD
YLLGATFPLELDLVELQRFWRLPVQYFFNRRLKVVFEPPMAVMADEEPFVLDGLNSFQLR
EQLLHRLLSDENCTPDMVQPLIEGVRSEMRAQGKLPIGAFGELEFDTNRVQAEALIEKLT
GLSHASLDDLEVDLTFTPFGEGKTIHLSGWLTQHYQSGLLRYRSGKIRSQDYLAGWIDHL
SMSAMGVAKVTHLIGYDKKEGVVHLKYPAMADAGQAKSLLNELIRLYIEGMTQPLAYFPK
TALAAIEAGISRGQWNDDEEKALKKMADTFNDGFLGAGEGADSYISRIWPKWNDQLAHQV
RLMSSLVLQGARLSVVDASEEA
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
gtgtttactgtctatcactccaatcaagtggatgtgctcaaatctctgttggtggaactg
attcgcctcaatcctttgcaaaatcccttcgacaaagagcaaatcttggtgcaaagccca
gggatgtctcaatggttgaaaatggaactggcgaaagagtttggtgtggcagcaaacatc
gaatttccgctacccgcgacatttatctgggatatgtttacccacgttttggcggatgtg
ccaaaacgcagtgcttttaacaaagaagcgatgacgtggaagctgatgcatttgttgccg
cagcaacttgcactggcggagttctcgcctttagctcgctatcttcaagacgatgaagaa
ggtgccaagctttaccaactgtcggaaaaaattgccgatatttttgatggttatttggtg
tatcgccctgaatggatacgtgattgggaagcggggaaggccgtggctgagattggtgat
gagcacccttggcagcccatgttgtggcaagcactgtatgaccataccgtcgcgcttggg
caatcgccgtaccatcgcgccaacttatacgaacacttcattgatagcttagaaaactac
actggccagtttgaacgcttgccgcagcgcttgtttgtttttggcattacctcattgcct
ccacgctacatggacgcgcttaaagcgctcggccagcatattgacgtgcatctgatgttt
accaacccgtgtcgatactattggggtgaagtgcgcgatcgaaaatttcttgctcgtttg
gcggcgaaacagcgtcagcaccttgtgtggcaacaagatcattcgcagcttcagggccaa
agtgagcaattgaaaggcagtattgaagacaatcttgccgatgaactgcataccgaggtg
gtgggcaacagcttgctggcttcgatgggcaaacttggtcgtgacaacatgtacttgttg
tcacaattggaatcgcatgagattgaagcgtttgtcgatatcgaaccagactcgctattg
catcaactgcaagccgacatcctcaacttggaagagcaccaagatgacgaccatatcgag
agcagccatcataaaccgctcatcgaggcgaatgatcgctctttgagcctgcacgtctgc
cacagcccaatgcgtgaagtggaagtgctgcacgatcaattgctggcgatgttcgatgcc
gatccaaccctcaaaccgcgcgatattatcgtgatggtggcggacatcaatgcctacagc
ccagcgattcaagcggtgtttggcaacgcgccgggtgaacgattcatcccctattccatt
tcagatcgaaccgccgatcaagaaagcccgattctcaacgcgtttttgacgttggtgaat
ctaccacaaatgcgctgcttggcgtcagagctgttggaactgctagaaacccctgcgatt
ttgcagaaattttccttgagtgaaacggaattcctgcaagcaaaacagtgggtggaagcg
tcaggtatccgttgggggctcgatgcgcaaactggatgtgagtttgacctacctcagaca
agacaaaatacctggcagtttggtattcaacgcatgttacttggctacgccatgccagaa
tcggctggcttgttccaaagcggtgaggaatggcttgctccttacaacgaagttcaggga
atgggagcggagctggcgggcaaactgagctacttcattgaaaaggtgcgctgctatcgc
cacaccttagctcaagcgcaaaacattgacgcatggcgacaacaattacacggtgtcttg
gcggatttcttcgccgtcgacttagaaggcgaagtggcattgaaatcgattcgcgatacg
ttgggacagttaaaagaacagttgagtgatgcggcatttgaggcggaattgtcaccgagt
gtgattcgtcaatatctgctcaataaactgtccggtagtcgtgtaagccagcgttttctt
gccggacaagtgaatttttgtaccttgatgccgatgcgttcgattccatttcgcaccgtc
tgtttattagggatgaacgatggcgtctatccacgcagtgtggcaccggaaggattcgat
ttaattcatggccgcgccagagcgggtgaccgctctcgccgcgacgatgaccgctacttg
ttccttgaggctctgttgtctgcgcagcaaagtgtttacatcagctatgtcggacgttca
gtgcaagacaacaccgagaaagtaccgtcggtgctggtggctgaattgatggagtattgt
cagcaaaactactgtttagtgggggatgagcatctgggtgtggatgaatccggtgcgcac
ctattaaaggcgatcagctgcgagcatcccatggtgccatttagccccaaagctttttta
ggtgaacctccgagcaacgcgaaaagctatgccaaagagtggattccagcggcccagcag
cagagcgaaggccaagtgccatcgcagcaaagtgcgccattttatcaagcccttgacgat
tatttactgggtgccacgttcccgcttgaactggatttggttgaactgcaacgtttctgg
cgactgccagtgcagtacttctttaatcgccgtttgaaagtcgttttcgagccgccaatg
gccgtgatggcagatgaagaaccgtttgtgttggatgggctcaacagcttccaattgcgt
gaacagttgttgcatcgtctcttatcggatgaaaactgcacgcctgacatggtacagccg
ctgattgagggcgtacgcagtgaaatgcgtgcacagggcaagttgccgatcggcgccttt
ggtgagttggaatttgacaccaaccgcgtgcaagctgaagcattaatagaaaaactaacc
ggactatctcacgcttctttggatgatctcgaagtggatctgacttttacgccatttggt
gaaggcaaaacgattcatttgagcggttggttaacgcagcactatcaatcgggtctattg
cgttatcgcagtggcaaaattcgctctcaagattacttagctggttggattgatcatctt
tcgatgtcggccatgggcgttgccaaagtgacgcatttgattggctacgacaagaaagaa
ggggttgtgcacctcaaatacccggcgatggcggatgctggccaggccaaatccttgctt
aacgaattgatccgcctgtatatcgaaggcatgactcagcctttggcgtatttccccaaa
accgcattggcggccatcgaagctggcataagccgcgggcaatggaacgatgatgaagag
aaagcgttgaaaaaaatggcggacaccttcaatgatggtttcttgggcgcaggggaaggc
gcagacagctacatcagccgtatttggccaaaatggaatgatcaactggcccatcaagtg
cgtttgatgagtagtttggtgctgcaaggggcaagattgtccgttgtggatgcgtcagag
gaagcatag
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