Vibrio vulnificus MO6-24/O: VVMO6_00873
Help
Entry
VVMO6_00873 CDS
T01415
Name
(GenBank) probable type IV pilus assembly FimV-related transmembrane protein
Organism
vvm
Vibrio vulnificus MO6-24/O
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
GIT_CC
LysM
Motif
Other DBs
NCBI-ProteinID:
ADV85895
LinkDB
All DBs
Position
I:968481..974336
Genome browser
AA seq
1951 aa
AA seq
DB search
MRQIFKRLLAPLLLMTALPTSVSQADGIRLVGPTGEVQSSPSFSEQVERANSPLPVSDEP
SRFYGPTSANETLWSIASKLRPANNVSVQQTLLAIYRLNPQAFENQNIHSLVPGSTLRVP
SLAQVRSASTEQAVTVMKAHQDKLNATSRPIAPTPVTRPVKVTPATPAQAVSETVKVEPQ
IDTTPVKTPDVPQVKTLEKQLEMSESELTALEEKNHNLRLMLAEVQSEVDGLKTELGDEN
RIRSEVEKLLAEEKAKLEEQQRMQPSAFDQFLSNGWMVAAAALIPGALIGLLIVMLLGRR
KEAEPSASETQTEAPLTPPPMSDSDLDDLTDDLTLDDDLFSDSDDNSELLFDDTMGDDEN
DVFGDLDDSDLDFNLEGEDGEDPFASIGDDGDLDTDFDDFDSSNNGISVKGSDKALGLEE
MERALDEVSPELEITDDEESDFDLSGENVGMSEDDLAELLASDEPTEDLGDSALDQSMLD
DLFSNLGDDDEVDEFDLGLDEDSAAAPTENKQMSDAMSGTMASDEDIDQLLAQFDEPVID
ESELETQSSLDELESLLESGADDTQDDLSTSLLDEMLEQASDDEVSLDPLDELEALAGLT
DDEIEVSPTDTELLDELLEADEEESLDEFDPLSELEELAAFGQDEVVPELDENSTDLLDE
LLESAPESDESLEWPEEELATAEESDLFDELIGLDESDKAQEDDAAESFDFAAELDAALD
SSEDFVELSVSEPAIEEVSAEVDSVDNTAIDELLDDVLPLEEASPEQDELTAEVEELVES
IDSPMADDEFEPTEFNSSHFAEDLANVAPTLDPLLDAFPEDIEEVSTAEAELNTDPQNLQ
ESLDDSTESLLEEAAPSESVLPTELLADLPLEEGESGDADDIDAQDDQDDDWLQAAIDEV
ESPRQSIDEYEPTTQTETAEQELLSDHEIATTAPELDVEESQEPQEEDWLQSAIDEVESP
QIDSELHEVDSDERIASTSLATEVTEEALDGHPDDAMLSELDATPAQDDELVDLVDDIAE
PVSTDAEALLAQDIEDAQELEATATEMPLEEPVHETPTPNAVPNEFGTPVEEDWAEAETL
FDGLVTDSELPQAQQEESLAGLAEAESTAEQDDSLDDLELLEFDEEDALEALADESAQEA
NAVLGEDAIGLDELALNEFGEDDELAVLADEPGFAEPSLESELEDIDLDELDFPEFGEEE
ALASLEEEPMLSEVELSESELATPPIDETELLEQAESAVTDLGSIEFDESELPEFGEEDA
LSAMADGPSLADFELDEPVEEGEIDLADEVEFDELELPEFGEDEALAAMADEPSYDAPVM
EEDAFAAEEPAVESDITSDDSALDEVLEPSEVATDNVESAEEQAQAETTDDVFDFDELEL
PEFGEDEALAAMADEPSYDAPVVEEEVFAAEEPAVESEVTSEESALDDVLEPSEVADDNV
ESAEEQAQAETTDDAFDFDELELPEFGEDEALAAMADEPSYDAPVVEEDAFATEEPAVES
EITSDESALDEVLEPSEAATDNVESAEEQVQAEITDDAFDVDELELPEFGEDEALVAMAD
EPSYDAPLVEEEAFAAEEPAVESEVTSEESALDDVLEPSEAATDNVESAEEQAQAETTDD
AFDFDELELPEFGEDEAAEAVASEPNIEPDAEPEAESDDFEIDELDLPEFGEEDAIVSVA
EELDEAPITSEPEEQDYHFDSLELPSIEESGELNTVNKPHINPSSYEEQDALFDVFAQEA
GFNIAEEEVLHSEFDEAAMAHLLSEDALDDNFFPESPDDEMAASAGMDIEAMLEVGGDDW
NGFKLPDNPSAEATNDVPAEEREIWSSEEALRQPNIDEENWAEQDDFDPKKNQYMTIDEL
MAQVDGDEVEFEEEDLKLDVGLDEFPDVIGDISNVDVDENAEASGKLDLAKIYIEMNDAE
GAIKLLEEAIVYGDDDVRREAKNLIDMINGR
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaaatttttaagcgcctgttagcccctttattgctaatgactgcgctaccgaca
tcagtttcacaagcggacggcattcgattagtcggtcctactggtgaagtgcaatcatcg
ccaagtttttcagaacaagttgagcgtgccaactcgccactgcctgtttccgatgaacct
tctcgtttctatggcccaacaagtgcaaacgaaaccttgtggtcaatcgccagcaaatta
cgccccgcaaataacgtctcggtacaacaaactctcttagccatttaccgattaaacccg
caggcgtttgaaaaccaaaatattcacagtttagtacctggtagtaccttgcgtgtgccg
tcgctcgctcaagtccgcagcgcttcaaccgagcaagcggttacggtgatgaaagcacat
caggataagctcaacgcgacttctcgtcctattgcgccaacgccagttactcgcccagtc
aaagtgacgccagcgacaccagcccaagcagtgagcgaaacggtgaaggtggagccccaa
atcgacaccacgccagtgaagacaccagacgttcctcaagtgaaaacacttgagaaacag
ctcgagatgtctgaaagcgaattaaccgcgctggaagaaaagaaccacaatttgcgtttg
atgttggcggaagttcagtccgaagtggatggattgaaaaccgagctgggtgatgaaaac
cgtatccgttccgaagtcgagaagttactcgcagaagaaaaggcgaagcttgaagaacag
caacgcatgcaaccatcggcgtttgatcaattcttatcaaatggctggatggtggctgcc
gctgccctgattcctggggcattgatcggccttttgattgtgatgctactggggcgccgc
aaagaagcggaaccaagcgcaagtgaaacacaaactgaagcgccattaacaccaccgcca
atgtcagattcggatctggacgatctgaccgatgatctcaccctcgatgatgacctcttc
agcgacagcgatgacaatagcgagttgctgtttgatgacactatgggagacgacgaaaac
gacgtctttggtgatcttgacgacagtgatctcgatttcaatcttgaaggcgaagatggt
gaagacccatttgctagcatcggtgatgacggcgatctggatactgacttcgacgacttt
gactcatcaaacaacggcatcagtgttaaaggttctgacaaagcgctgggtcttgaagag
atggagcgtgcgctggatgaagtcagcccagagctagaaatcactgacgacgaagagagt
gactttgatctttctggtgaaaacgtcggcatgtcagaagatgacttagcggaattgctg
gcgtccgatgaaccgacggaagacttaggtgattcagcccttgaccagtcaatgcttgat
gatctgttctccaacttgggtgacgatgatgaagttgacgaatttgatttaggtttagat
gaagatagcgcggctgcaccaactgaaaacaaacagatgtctgatgcaatgtctggaacg
atggcatcagatgaagatattgatcagctactggcccagtttgatgagccagtcatcgat
gaatcagaactggaaacgcaaagcagcctagacgaattagagtcactattggagtctggt
gctgacgacacgcaagacgacttatccacctcattgttagatgagatgttggaacaggct
tcagatgatgaagtgagcctcgatcctcttgatgagctcgaagctctggcgggtctaact
gacgatgagattgaggtatcgccaacagacacagagctgcttgatgagctactcgaagcg
gacgaagaagaatcacttgatgaatttgatccactcagtgagttagaggaactcgcggcc
tttggtcaagatgaggttgtgcctgagctggatgaaaacagcaccgatctgctcgatgaa
ttactggaaagcgcaccagagagtgatgagtcgcttgagtggccagaagaagagttggca
acggcagaggaaagcgatctctttgatgaactgattggcttagatgagagcgacaaagct
caagaggacgatgccgctgaatcgttcgattttgccgcagagctggatgctgcattagat
tcatcagaagattttgttgaactgtccgtttctgaacctgcgattgaagaggtgagtgcg
gaagttgactcggtagacaacacagcgattgatgagctattggatgacgttctccctctt
gaggaagcgtcacctgagcaagatgaactgacggcagaggtcgaagaacttgttgagtcc
atcgatagcccaatggctgacgatgaatttgaaccaacagaattcaatagcagccatttt
gctgaagatttggctaacgttgcgccgacgcttgatccactgctagatgcattcccagag
gatattgaagaagtcagcaccgctgaagcagaactgaataccgatccccagaacctacaa
gagtcgctggacgattcaacagaatcactgcttgaagaggcggcgccgtctgagtctgtc
ttacctacagagctgcttgccgatctgccattggaagagggggaaagtggtgatgccgat
gacatcgatgctcaagatgaccaagatgatgattggttgcaagccgccattgatgaggta
gaaagcccacgtcagtcaatcgatgagtatgagcctacaacgcagacggaaaccgcagag
caagaactgctttctgaccatgagatagcgacaacggcacctgagcttgatgttgaggaa
tcacaagagccacaggaagaagactggctacaaagtgcgattgatgaagttgaatcaccg
cagattgattcagagctgcatgaggtcgattcagatgagcgcattgcatcgacttctttg
gcgacagaggttactgaagaagcgttagatgggcatcctgatgacgccatgctttcagag
ctcgatgccacaccagctcaagacgatgaactggtggatcttgttgatgacatcgcagag
cctgtttcaactgacgcagaagcgttgttggcgcaggacattgaggatgctcaagagctt
gaggcaactgcaacggagatgccgttagaagagcctgttcatgaaacgccgacaccaaac
gcagtgccaaatgaatttggtactcccgtcgaagaagattgggcagaagcagagactctt
tttgatggtctagtaaccgacagtgaactgccacaagcacaacaagaagaatcgctagca
ggattagcagaggctgaatcgacggcagaacaggacgacagtctcgacgacttagaactg
ttggaattcgatgaagaagatgcactggaagccttagctgatgagtctgcacaagaagcc
aatgcggtgctcggtgaagatgctatcggcttggatgagttagcgcttaacgagtttggc
gaagatgacgagttggctgtgctagccgatgagcctggttttgcggaaccttcgcttgag
agtgagcttgaagacattgatcttgacgaactggatttcccagagtttggtgaagaagaa
gcgttagcatctcttgaagaggagccgatgctatctgaggtcgaattgtctgagtcggag
ttggcgacgccaccaatcgacgaaactgagctactggagcaagctgaaagcgcggtgacc
gatctcggcagcattgagtttgatgagagtgaactaccggagttcggtgaggaagatgca
ctgtctgcaatggcagatggcccttcactcgcagattttgaattagatgagcccgttgaa
gaaggtgaaatcgaccttgctgatgaggttgagtttgacgaactcgaactgccagagttt
ggcgaagacgaagcactggctgcgatggcagacgagccttcttacgatgctccggttatg
gaagaggatgcgtttgcggctgaagagccagccgtcgaatccgacatcacaagtgacgac
tccgcgttagatgaagtgcttgagccaagcgaagtcgcaactgacaacgtagaaagtgca
gaagagcaagctcaagccgaaacaacggacgatgtattcgactttgacgagctagagctg
ccagagtttggcgaagacgaagcgctggccgcaatggcagatgagccttcttacgacgct
ccggttgtggaagaggaagtgtttgcggctgaagagccagccgttgaatctgaagtgacc
agcgaagaatctgcgttagatgacgttcttgagccaagcgaagttgcagatgacaacgta
gaaagtgcagaagagcaagctcaagccgaaacaacggacgatgcgttcgactttgacgaa
ctcgaattgccagagtttggtgaagacgaagcactggccgcaatggcagacgagccttct
tacgatgccccagttgtggaagaggacgcgtttgcaacggaagagccagccgtcgaatcc
gaaatcacaagtgacgagtccgcgttagatgaagtgcttgagccaagcgaagcggcaact
gacaacgtagaaagtgctgaagagcaagttcaagccgaaataacggacgatgcgttcgac
gttgacgagctagaactgcctgagtttggcgaagacgaagcgctggtcgcaatggcagac
gagccttcttacgatgctccgcttgtagaagaggaagcgtttgcggccgaagagccagcc
gttgaatctgaagtgacaagcgaagaatctgcgttagatgacgttcttgagccaagcgaa
gcggcaactgacaacgtagaaagtgcagaagagcaagctcaagccgaaacaacggacgat
gcgttcgactttgacgaactagaactgccggagtttggcgaagacgaagcggcagaagcg
gttgccagtgagccaaacatcgaacctgacgctgagcctgaagcagaatcagacgatttt
gaaattgatgaactcgatctgccagaatttggcgaagaagatgccatcgtttcggtggca
gaggagctcgatgaagcgccaattacctccgagccagaagagcaagattatcattttgat
tctttggaattaccatcgattgaagagagtggtgagttaaataccgttaacaagccgcat
atcaatccttcttcctatgaagaacaagatgccctatttgatgtttttgctcaggaagcg
ggcttcaatatcgcagaagaagaggtgcttcattctgaatttgatgaagcagcgatggcg
catctgctttctgaagacgctttggatgataatttcttcccagaatcgcccgatgatgaa
atggctgccagtgctggtatggacattgaggcgatgttggaagtcggcggcgacgactgg
aatggctttaaactgccggataacccatcagcagaagcaacgaatgatgtgcctgctgaa
gagcgtgaaatttggagctcagaagaggccctccgacaacccaatatcgatgaggaaaac
tgggccgaacaagacgactttgatccgaagaaaaaccagtacatgacgattgacgagctc
atggctcaagttgatggtgatgaagtggagttcgaagaggaagatctcaaactggatgtc
ggcctggatgaatttcctgacgtgattggggacattagcaacgtggatgtggatgaaaac
gcagaagcgtcgggtaaattggatctggcaaaaatttatatcgaaatgaacgatgcagaa
ggggcaatcaaactgctcgaagaagcgattgtttatggtgatgatgatgttcgccgtgaa
gcgaaaaatctcattgatatgattaacggccgttag
DBGET
integrated database retrieval system
