Vibrio vulnificus MO6-24/O: VVMO6_00999
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Entry
VVMO6_00999 CDS
T01415
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vvm
Vibrio vulnificus MO6-24/O
Brite
KEGG Orthology (KO) [BR:
vvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvm03032
]
VVMO6_00999
03400 DNA repair and recombination proteins [BR:
vvm03400
]
VVMO6_00999
Enzymes [BR:
vvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
VVMO6_00999
DNA replication proteins [BR:
vvm03032
]
Prokaryotic type
DNA Topoisomerases
VVMO6_00999
DNA repair and recombination proteins [BR:
vvm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VVMO6_00999
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Motif
Other DBs
NCBI-ProteinID:
ADV86021
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Position
I:1114452..1117076
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AA seq
874 aa
AA seq
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MGKSLVIVESPAKAKTINKYLGKDFVVKSSVGHVRDLPTAGQSTGEKAAAISTKGMSVEE
KARIKQEKDRNALIKKMGIDPYHDWAANYQILPGKEKVVSELQKLAKDADFVYLATDLDR
EGEAIAWHLREIIGGDEARYKRVVFNEITKNAIQQAFQKPGHLNMDGVNAQQARRFMDRV
VGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFVPEEFWDIHANTLTQETMPF
KLLVAQKSGDAFRPVNEAETNAALAVLQKAQFEVCKREDRPTKSKPSAPFITSTLQQAAS
TRLGYGVKKTMMLAQRLYEAGYITYMRTDSTNLSQEAVEAVRGYISDEFGSRYLPKAPLV
YGSKQGAQEAHEAIRPSDVNVKADALEGVDADAHKLYALIWNQFVACQMTEAEYDSTTVS
VKAAEYTLKAKGRILKFDGWTRVQRPLGKNEDTILPAVQVGDKLNLESLEPKQHFTKPPA
RFTEAALVKELEKRGIGRPSTYASIISTIQDRGYVKVDQRRFYAEKMGEIVTDRLDDSFN
DLMNYDFTARMEEKLDKIAEGDVNWKDVLNQFFADFTTDLGRAEEDEAHGGMKPNHIVMT
DIQCPTCSRPMGIRTASTGVFLGCSGYALPVKERCKTTINLGDEEGIINVLEEDVETAAL
RAKKRCPICETAMDAYLIDDKRKMHVCGNNPNCEGYLVEHGEFKVKGYDGPVVECDKCGS
DMVLKNGRFGKYMDCTSETCKNTRKILKNGEVAPPKEDPVHFPELPCSNSDAYFVLRDGA
AGLFLAASNFPKSRETRVPLVSELARFAERLPEKYKHLAQAPTQDPDGVEAVVRFSRKTK
ENYVRTEVDGKPTGWTALYVDGKWEVTDKRKNAK
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcgctcgttatagtggagtcgccagctaaggctaaaacgatcaataagtat
cttggaaaagactttgtggttaagtcgagtgttggccatgtacgcgacttgcctacagca
ggtcagagtacaggcgaaaaagcggctgccatttctactaagggtatgagcgtagaagaa
aaggctcgtatcaagcaagagaaagatcgtaatgcactgatcaagaaaatgggtatagac
ccatatcatgattgggctgcaaattatcaaattctgccaggcaaagaaaaagttgtcagc
gaattacaaaagctagctaaagacgctgattttgtttatctcgcaaccgatttggaccgc
gagggggaagctattgcgtggcaccttcgtgagatcatcggtggcgatgaagcacgctat
aaacgagtcgtttttaacgaaattactaagaatgcaattcagcaagcattccaaaaacct
ggccatctcaatatggatggggttaacgcacaacaagcgcgtcgattcatggaccgcgtt
gtgggctttatggtgtccccgttactgtggaagaaagtggctcgcggtttgtctgctggt
cgtgtgcaatcggtcgctgtgaagcttttggtggaacgtgaacgagagatcaaagcgttt
gtaccggaagaattttgggacattcacgccaacacactgacgcaagaaacgatgccattt
aagcttttggttgctcaaaagtctggtgacgcgttccgcccagtcaatgaagcggaaact
aatgccgctctggcggttctgcaaaaagcacagtttgaagtttgcaagcgggaagaccgt
cctactaagagcaaaccttcagcgccgtttattacgtcaacgctccaacaagcggcaagt
actcgcttaggctatggcgttaagaaaaccatgatgttggctcagcgtttgtacgaagcc
ggttacatcacctatatgcgtactgactcgaccaacttaagccaagaagcggtagaagca
gttcgtgggtacatcagtgatgaatttggttctcgctacttgccaaaagcaccattggtt
tatggtagcaagcaaggggcacaagaagcacacgaagcgattcgtccttcagatgtcaac
gtcaaagcagatgctctagagggtgttgacgctgacgcacacaaactttatgccttgatt
tggaatcagtttgtcgcctgtcaaatgactgaagctgagtacgactcaacgacggtgagc
gttaaagccgcagaatataccttgaaagcaaaaggtcgcattctgaaatttgatggttgg
actcgcgtgcagcgcccactgggcaaaaatgaagatacgatccttccagcggttcaagtg
ggcgataagctaaaccttgagtccttagagccgaaacagcactttaccaagccgccggct
cgttttaccgaagctgctttggttaaagagttagagaagcgcggcattggtcgtccttca
acttatgcctccatcatctcgactattcaagaccgtggttacgtaaaagtagaccaacgt
cgtttctacgccgagaaaatgggtgaaatcgtgactgaccgtcttgatgacagtttcaac
gatctgatgaactacgactttactgctcgtatggaagagaagctggataaaatcgccgaa
ggcgatgtgaactggaaagacgttctgaatcagttcttcgcagacttcaccacggatctt
ggccgagccgaagaagacgaagcgcatggcggtatgaagccaaatcatattgttatgacc
gatattcaatgtccgacctgttcgcgtccaatgggcattcgtactgcttctactggggtt
ttccttggctgttctggctacgcattgccagtgaaagaacgctgtaagacgaccattaat
cttggtgatgaagaaggcatcatcaacgtgcttgaagaagacgttgaaactgctgcgctt
cgagcaaagaaacgttgtcctatctgtgaaaccgcgatggatgcatacctgatcgatgat
aaacgcaagatgcacgtatgtggtaacaatccaaactgtgaaggttacttagtcgagcat
ggtgagtttaaagtcaaaggttatgacggccctgtggttgagtgtgacaagtgtggcagt
gacatggtgctcaaaaacggtcgctttggtaaatacatggattgcacaagtgagacctgc
aagaacacgcgtaagatcctgaaaaacggtgaagtagcgccaccaaaagaagatcctgtg
catttccctgaattgccatgcagtaattcagatgcgtactttgtgcttcgtgatggtgcc
gctggcttattccttgccgcgagtaatttcccgaaatctagagaaacgcgtgtgccgttg
gtttctgagctggctcgatttgctgagcgtctgccagagaaatacaaacaccttgcacaa
gcgccgacgcaagatcctgatggggtcgaggcggttgttcgttttagccgcaaaaccaaa
gaaaactatgtacgcactgaagtcgatggaaaaccgaccggttggacagcgctctatgtc
gatggtaaatgggaagtgacggataaacgcaaaaacgcgaaataa
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