Vibrio vulnificus MO6-24/O: VVMO6_01118
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Entry
VVMO6_01118 CDS
T01415
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vvm
Vibrio vulnificus MO6-24/O
Pathway
vvm03030
DNA replication
vvm03430
Mismatch repair
vvm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VVMO6_01118
03430 Mismatch repair
VVMO6_01118
03440 Homologous recombination
VVMO6_01118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvm03032
]
VVMO6_01118
03400 DNA repair and recombination proteins [BR:
vvm03400
]
VVMO6_01118
Enzymes [BR:
vvm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VVMO6_01118
DNA replication proteins [BR:
vvm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VVMO6_01118
DNA repair and recombination proteins [BR:
vvm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VVMO6_01118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ADV86140
LinkDB
All DBs
Position
I:complement(1252761..1253477)
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AA seq
238 aa
AA seq
DB search
MISLLKPTKLEWQHKFLQKQQRVADARLRRFYQSPPVSGETVIGSTPLVALDFETTGLNP
NQHDILSIGLVPFDLHRIRLQQARYWTVKPEDQLHEESVVIHGITHSKVQRAPDLIDVLD
EVLDCLAGKVVVVHYQHIERPFFDSALRKRINEGIEFPLIDTMEIESQWAKQQFGGWLNR
LKGKSLPSVRLAQSRRRYGLPDYSAHHALTDAIATAELFQAQIAHHFSSQTPVSELWR
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgatctctttactcaaacccaccaagcttgaatggcagcacaaattcctgcaaaagcag
cagcgagttgccgatgcgcgcttgcgccgattttatcaatcaccgcccgtctcgggtgag
acagtgataggctcaacgccactggtggccttagactttgaaaccaccggcttaaatccc
aatcaacacgatattctttccattgggctggtgccctttgatttacaccgaatacggctg
caacaagcacgctattggacagtcaaaccggaagatcagttgcatgaagagtccgtggtc
attcatggtattacacacagcaaagttcagcgcgcgcccgacttaatcgacgtattggat
gaagtgcttgattgccttgcgggtaaagtggtggtggttcactaccaacatattgagcga
ccattttttgatagcgcgttacgtaagcgaatcaatgaaggcattgagtttcccctgatc
gacaccatggaaattgaaagtcagtgggcaaaacagcaatttggcggctggttgaatcga
ctcaaagggaaatcgctgccttcagtccgcttagcccaaagtcgtcgtcgctatggtcta
cctgattactctgcgcaccacgcactcaccgatgccattgctaccgctgagctgttccaa
gcacagattgcccatcacttttcctcgcagacgcctgtttcagagctgtggcgatag
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