Vibrio vulnificus MO6-24/O: VVMO6_01746
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Entry
VVMO6_01746 CDS
T01415
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
vvm
Vibrio vulnificus MO6-24/O
Pathway
vvm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VVMO6_01746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvm03400
]
VVMO6_01746
Enzymes [BR:
vvm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
VVMO6_01746
DNA repair and recombination proteins [BR:
vvm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
VVMO6_01746
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VVMO6_01746
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VVMO6_01746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ADV86768
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All DBs
Position
I:1866076..1867497
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AA seq
473 aa
AA seq
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MQQDNQPSFFFFDYETWGTSPAKDRPSQFAGVRTDENFNIIGEPLVIYCRPPADYLPAPE
AALITGITPQKAQKEGLPEPEFIAKIHAELSRPNTTSLGYNSIRFDDEVTRYTCYRNFLD
PYSWSWQNGNSRWDLLDVMRACHALRPEGVEWPENEEGFTSFKLEHLSVANGIEHSNAHD
AMADVIATIEMAKKVKAAQPKLFDYFFSMRHKRKLNELIDIVNMTPLMHVSGMLGRECQY
TSWIVPLAWHPTNNNAVIVVDLAKDPQPLFDLDADALHERLYTRHDELGDLLPVPVKLVH
LNKCPILAPAKTLTAENAANIGIDREQCLANLALIRQHPEVREKLVQLFSIEREFEKSHD
VDTLLYDGFFSPADKASMDIIRQTDPTHLAALDITFNDKRIEPLLFRYRARNYPWTLDEN
EQRRWANHCREYFESRIEEYMLNLENLVHEHESDEKKMAILKSVYRYTESLIS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaagacaatcagccctctttcttcttttttgactatgagacttggggaaccagt
ccagcaaaagatcgcccatcgcaatttgctggcgttcgtaccgatgaaaacttcaatatc
atcggcgaaccattggtgatttattgtcgcccacctgccgattatttaccggcccccgaa
gccgcactcattaccggaattacgccacaaaaagcgcagaaagaaggcttacccgagcca
gaatttatcgcaaaaatccacgcagagttgtcgcgtccgaacaccactagcctcggctac
aacagtattcgcttcgatgacgaagtcacgcgttacacctgctatcgcaatttcctcgat
ccctattcatggagctggcaaaacggcaattcacgctgggatctgcttgatgtgatgcga
gcttgtcacgcattaagaccggaaggggtggaatggccggaaaatgaagaaggctttacc
agctttaaactggagcacctttctgtggccaatggcattgaacacagtaacgcccatgat
gcgatggccgatgtgatcgccaccatcgaaatggcgaaaaaagtcaaagccgcgcaaccc
aaattgtttgattacttctttagcatgcgccataagcgtaagctcaatgagctgatcgat
attgttaacatgacccctttgatgcatgtctctggcatgttaggccgtgaatgccaatac
accagttggatagtgccgttagcttggcacccgaccaacaacaatgcggtgattgtggtc
gacttagccaaagatcctcaacccctctttgatttggatgccgatgcgctgcatgagcgt
ctttacactcgtcatgatgagctcggcgatttattgcctgtgccagttaaactggtgcat
ttgaataagtgcccaattttagcaccagccaaaaccctcactgcggagaatgccgccaat
atcggcatcgaccgagaacaatgtttggcaaacttagcccttattcgccagcacccagaa
gtgcgagaaaagttggtgcagctgttctcaattgaacgcgagttcgagaaaagtcatgat
gtcgataccctgttgtacgacggtttcttctcgcctgccgacaaagcctcgatggacatt
atccgccaaaccgatccaacgcaccttgccgctttggacatcacgtttaacgataaacgc
atcgagccgctgctgtttcgctaccgtgcgcgcaattacccatggacgttggatgagaac
gaacagcgccgttgggcgaatcattgccgcgaatacttcgaaagtcgaattgaagagtac
atgcttaatttggaaaacttagttcacgaacatgaaagtgacgaaaagaaaatggcgata
ttaaaatccgtgtaccgctatactgagagcttgatctcataa
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