Vibrio vulnificus MO6-24/O: VVMO6_02420
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Entry
VVMO6_02420 CDS
T01415
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
vvm
Vibrio vulnificus MO6-24/O
Pathway
vvm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VVMO6_02420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvm03400
]
VVMO6_02420
Enzymes [BR:
vvm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
VVMO6_02420
DNA repair and recombination proteins [BR:
vvm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
VVMO6_02420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DHQ_synthase
Motif
Other DBs
NCBI-ProteinID:
ADV87442
LinkDB
All DBs
Position
I:2601689..2603020
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AA seq
443 aa
AA seq
DB search
MSSLTNPNIFTVSRLNSEVRLLLENQLGIVWLVGEISNFSAPVSGHWYFTLKDSMAQVKC
AMFRGNNRLVSFKPTNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQFDALKMK
LASEGLFAQSSKQAIPEHPKCVGIITSKTGAALYDILDVLKRRDPSLPVVIYPTLVQGEE
AAIQIAQAIGRANSRNECDVLIVGRGGGSLEDLWCFNNEIVARTIAASQIPIISAVGHEI
DVTIADFVADLRAPTPSAAAELVSRDNSHKDQALMSREQKLRAAWRHYLTEQNRTIVSLS
HRLEKQHPRYRLMRQTQQADELQIRLQRAMEKYLAQREQKVSRVQHKLQLLSPVRQISEQ
KNALARVEQKMMDAMDRKLLRLRHQIAIAAEKLDTVSPLATLKRGYSITQSESGDVITRQ
SQIKTGDTLVTRLSDGEIRSTVN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttctctgaccaatccaaacatcttcaccgtctcacgtttaaattctgaagttcgt
ttattgcttgaaaaccaattaggcattgtttggttagtgggagagatttctaacttctct
gcaccggtttctggtcactggtacttcactcttaaagattcaatggcacaagtaaaatgc
gccatgtttagagggaataaccggctcgtttcttttaagcccaccaatggtaatcaagtg
ttggtcaaagcacgtctttcgttgtacgagccacgtggtgattatcagttgatcatcgaa
agcatgcagccagaaggcgatggccgtctgcaacagcaatttgatgcgttaaaaatgaaa
ctggccagcgaagggcttttcgcccaatccagcaaacaggccattccagagcacccgaag
tgtgtaggcattatcacctcgaagacaggtgcagcgctttatgacattctcgatgtactg
aaacgccgagatccttcccttcctgtggtcatttatccgactctggtgcaaggagaagag
gccgccattcaaatcgctcaagcgattggtcgagcaaacagccgtaacgaatgtgatgtc
ttaattgtcggtcgtggcggtggctcattggaagatctttggtgctttaacaatgaaatt
gtcgcccgcactattgctgccagccaaatcccaattatctctgcggttggccacgagatt
gatgtgacgatcgcagactttgttgcagatttacgcgcaccaacgccatccgcagcagca
gaactggttagccgtgataacagccacaaagatcaagccttaatgagccgtgagcaaaaa
ctgcgcgcagcatggcgtcattacctcaccgagcaaaatcgcaccatagtctcgctgagc
catcgactagagaaacagcatcctcgctatcgcttgatgcgtcagactcagcaagctgat
gagttgcagatccgcttacaacgagcgatggaaaagtatctggcacaacgagaacaaaag
gtatctcgtgttcagcacaaactgcagttgctttcacctgttcgtcaaatcagtgaacaa
aaaaatgcgcttgcacgagtggaacagaagatgatggatgcaatggaccgcaagctgcta
aggttgcgccaccagatcgcgatcgcggcggagaaactcgacactgtaagccccttggcg
acactgaaacgaggctactccattacgcaaagtgaatcaggtgacgtgattacgcgtcaa
tcacaaattaaaacgggcgacactttggtcacccgcttatccgatggtgaaatacgctct
accgtgaactaa
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