Entry |
|
Name |
(GenBank) ATP-dependent RNA helicase SrmB
|
KO |
|
Organism |
vvm Vibrio vulnificus MO6-24/O
|
Brite |
KEGG Orthology (KO) [BR:vvm00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:vvm03009]
VVMO6_02531
Enzymes [BR:vvm01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
VVMO6_02531
Ribosome biogenesis [BR:vvm03009]
Prokaryotic type
rRNA helicases
VVMO6_02531
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
I:2723467..2724693
|
AA seq |
408 aa
MIRTFADLDLDPNLLAAIEEMGYERPTQIQAEAIPQALEGRDILASAPTGTGKTAAFVLP
ALQYLQDFPRRKPGPARVLILTPTRELAMQVADQARALAKNTSLNIFTITGGVQYQEHAD
ILATTQDIVVATPGRLMEYIQAERFDCRAIEWLILDEADRMLDMGFAPTVDRLSNECRWR
KQTMLFSATLEGKGVEGFTADLLNDPADIDAEPSRRERKKITQWYYRADSMEHKLALLKD
IINNQAERTIVFLKTRERLADLRAHLESEQVNCAWIQGEMPQDRRNNAIARFRDGSVNVL
LATDVAARGIDLPDVSHVVNFDMPRSADVYLHRIGRTARAGKKGNAISIVEAHDQPMMDR
VARYVKEDIKERFVKELRPQHKKPVFKKKKKKDDKKTSVKKKSTKKKK |
NT seq |
1227 nt +upstreamnt +downstreamnt
gtgatcagaacctttgccgatcttgatcttgacccaaacttgctggctgccatcgaagag
atgggctacgagcgtccaactcaaattcaggcagaagcaattccacaagccctagaaggc
cgtgatattcttgcttctgctccgacaggaaccggaaaaaccgccgcatttgtcttgcct
gcgctgcaatacttgcaagattttccacgccgtaaaccaggaccagcacgcgttcttatc
ctcacgccaacccgtgagcttgcgatgcaagtggccgatcaagctcgtgcgcttgccaaa
aataccagtttgaacattttcaccatcacaggtggtgttcaataccaagaacatgcggat
atccttgcgaccacacaagatatcgtggtagcgacaccgggccgcttgatggagtacatc
caagcagaacgctttgattgccgcgcgattgaatggctgatcctcgatgaagcagaccgc
atgcttgacatgggctttgctccgacagtggatcgcctatccaatgagtgtcgttggcgc
aaacagaccatgctcttctctgcgaccctagaaggcaaaggagtggaaggttttaccgcg
gatctactgaacgatcctgcggacattgatgcagagccttcgcgccgcgagcgtaaaaaa
atcacccagtggtattaccgtgcagatagcatggagcacaagctcgcgctactgaaagac
atcatcaacaaccaagcggaacgtacgattgttttcctcaaaacacgtgagcgtttagcg
gatctgcgtgctcacctcgaaagcgaacaagtcaattgcgcttggattcaaggtgaaatg
ccgcaagatcgtcgtaacaacgcgattgctcgcttccgtgatggcagtgtgaatgtacta
cttgcaacggatgtcgcagctcgtggtatcgacttgcctgacgtgtcacacgttgtaaac
ttcgacatgccacgcagtgccgatgtttaccttcaccgcatcggtcgtaccgctcgcgca
ggtaagaaaggcaacgcaatctctattgtagaagcccacgaccaacccatgatggatcgc
gttgctcgctatgtgaaagaggatattaaagagcgctttgtcaaagagcttcgccctcaa
cacaagaagccggtgtttaagaagaaaaagaaaaaagacgataaaaaaacgtcagtgaaa
aagaaaagcaccaaaaagaaaaagtaa |