KEGG   Vibrio vulnificus MO6-24/O: VVMO6_02531
Entry
VVMO6_02531       CDS       T01415                                 
Name
(GenBank) ATP-dependent RNA helicase SrmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
vvm  Vibrio vulnificus MO6-24/O
Brite
KEGG Orthology (KO) [BR:vvm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vvm03009]
    VVMO6_02531
Enzymes [BR:vvm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     VVMO6_02531
Ribosome biogenesis [BR:vvm03009]
 Prokaryotic type
  rRNA helicases
   VVMO6_02531
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Helicase_C_2 AAA_11 AAA_30 AtuA_ferredoxin Utp25_C AAA_22
Other DBs
NCBI-ProteinID: ADV87553
LinkDB
Position
I:2723467..2724693
AA seq 408 aa
MIRTFADLDLDPNLLAAIEEMGYERPTQIQAEAIPQALEGRDILASAPTGTGKTAAFVLP
ALQYLQDFPRRKPGPARVLILTPTRELAMQVADQARALAKNTSLNIFTITGGVQYQEHAD
ILATTQDIVVATPGRLMEYIQAERFDCRAIEWLILDEADRMLDMGFAPTVDRLSNECRWR
KQTMLFSATLEGKGVEGFTADLLNDPADIDAEPSRRERKKITQWYYRADSMEHKLALLKD
IINNQAERTIVFLKTRERLADLRAHLESEQVNCAWIQGEMPQDRRNNAIARFRDGSVNVL
LATDVAARGIDLPDVSHVVNFDMPRSADVYLHRIGRTARAGKKGNAISIVEAHDQPMMDR
VARYVKEDIKERFVKELRPQHKKPVFKKKKKKDDKKTSVKKKSTKKKK
NT seq 1227 nt   +upstreamnt  +downstreamnt
gtgatcagaacctttgccgatcttgatcttgacccaaacttgctggctgccatcgaagag
atgggctacgagcgtccaactcaaattcaggcagaagcaattccacaagccctagaaggc
cgtgatattcttgcttctgctccgacaggaaccggaaaaaccgccgcatttgtcttgcct
gcgctgcaatacttgcaagattttccacgccgtaaaccaggaccagcacgcgttcttatc
ctcacgccaacccgtgagcttgcgatgcaagtggccgatcaagctcgtgcgcttgccaaa
aataccagtttgaacattttcaccatcacaggtggtgttcaataccaagaacatgcggat
atccttgcgaccacacaagatatcgtggtagcgacaccgggccgcttgatggagtacatc
caagcagaacgctttgattgccgcgcgattgaatggctgatcctcgatgaagcagaccgc
atgcttgacatgggctttgctccgacagtggatcgcctatccaatgagtgtcgttggcgc
aaacagaccatgctcttctctgcgaccctagaaggcaaaggagtggaaggttttaccgcg
gatctactgaacgatcctgcggacattgatgcagagccttcgcgccgcgagcgtaaaaaa
atcacccagtggtattaccgtgcagatagcatggagcacaagctcgcgctactgaaagac
atcatcaacaaccaagcggaacgtacgattgttttcctcaaaacacgtgagcgtttagcg
gatctgcgtgctcacctcgaaagcgaacaagtcaattgcgcttggattcaaggtgaaatg
ccgcaagatcgtcgtaacaacgcgattgctcgcttccgtgatggcagtgtgaatgtacta
cttgcaacggatgtcgcagctcgtggtatcgacttgcctgacgtgtcacacgttgtaaac
ttcgacatgccacgcagtgccgatgtttaccttcaccgcatcggtcgtaccgctcgcgca
ggtaagaaaggcaacgcaatctctattgtagaagcccacgaccaacccatgatggatcgc
gttgctcgctatgtgaaagaggatattaaagagcgctttgtcaaagagcttcgccctcaa
cacaagaagccggtgtttaagaagaaaaagaaaaaagacgataaaaaaacgtcagtgaaa
aagaaaagcaccaaaaagaaaaagtaa

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