Vibrio vulnificus MO6-24/O: VVMO6_02730
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Entry
VVMO6_02730 CDS
T01415
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vvm
Vibrio vulnificus MO6-24/O
Pathway
vvm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vvm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VVMO6_02730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvm03021
]
VVMO6_02730
03400 DNA repair and recombination proteins [BR:
vvm03400
]
VVMO6_02730
Enzymes [BR:
vvm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VVMO6_02730
Transcription machinery [BR:
vvm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
VVMO6_02730
DNA repair and recombination proteins [BR:
vvm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
VVMO6_02730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ADV87752
LinkDB
All DBs
Position
I:complement(2940006..2940998)
Genome browser
AA seq
330 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQISSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IEGVLHEYSTKEGVQEDILEILLNLKGLAVRVAEGKDEVFITLNKSGSGPVVAGDITHDG
DVEIANPEHVICHLTDDNAEIAMRIKVERGRGYVPASARIHTEEDERPIGRLLVDATYSP
VDKIAYAVEAARVEQRTDLDKLVIDMETNGTLEPEEAIRRAATILAEQLDAFVDLRDVRV
PEEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKS
LTEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagaatttcttaagccacgtctagttgacatcgaacagatcagc
tcgacccacgcaaaagtaactcttgagccattggagcgtggtttcggccatactctaggt
aatgcacttcgccgtattcttctatcttctatgccaggttgtgctgtaacagaagtagaa
attgaaggcgttcttcatgagtacagcactaaagaaggcgttcaagaagatattcttgaa
atcctactaaacctaaaaggtttggctgtacgcgttgccgaaggcaaagatgaagtgttc
attacactgaacaaatcaggctcgggccctgtggttgcaggtgacatcacccatgacggt
gatgtagagatcgctaaccctgaacacgtaatttgtcacctaacggatgacaacgcagag
atcgcaatgcgcatcaaagtagaacgtggtcgtggttatgttccagcttcagctcgtatc
catactgaagaagatgagcgtccaatcggtcgcctactagtagacgctacttacagccca
gtagacaaaattgcctacgctgtagaagcagctcgtgtagaacagcgcactgacttagac
aagcttgttatcgatatggaaacgaacggtactcttgaacctgaggaagcaatccgtcgc
gcagcaactattcttgctgagcaattggatgcgttcgtagatcttcgtgatgtacgtgta
cctgaggagaaggaagagaagccagaattcgatccgatcctactgcgtcctgtagacgat
cttgaactaacagttcgctctgctaactgtctgaaagcagaagcgattcactacatcggt
gatctagtacaacgtactgaggttgagctacttaaaacgccaaaccttggtaaaaaatct
cttactgagattaaagacgtacttgcgtcacgtggtctgtctctgggcatgcgcctagaa
aactggccacctgcatcaatcgctgaagattaa
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