Vibrio vulnificus MO6-24/O: VVMO6_02895
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Entry
VVMO6_02895 CDS
T01415
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vvm
Vibrio vulnificus MO6-24/O
Pathway
vvm03030
DNA replication
vvm03410
Base excision repair
vvm03420
Nucleotide excision repair
vvm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VVMO6_02895
03410 Base excision repair
VVMO6_02895
03420 Nucleotide excision repair
VVMO6_02895
03440 Homologous recombination
VVMO6_02895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvm03032
]
VVMO6_02895
03400 DNA repair and recombination proteins [BR:
vvm03400
]
VVMO6_02895
Enzymes [BR:
vvm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VVMO6_02895
DNA replication proteins [BR:
vvm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
VVMO6_02895
DNA repair and recombination proteins [BR:
vvm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
VVMO6_02895
NER (nucleotide excision repair)
GGR (global genome repair) factors
VVMO6_02895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ADV87917
LinkDB
All DBs
Position
I:complement(3100019..3102814)
Genome browser
AA seq
931 aa
AA seq
DB search
MATIPENPLILIDGSSYLYRAFHAYPGTMSNGDIPTNAVYGVVNMLRSMMRQFASDRIAV
VFDAKGKTFRDDMYPEYKANRPPMPDDLRCQIEPLHQVIKAMGLPLIAIEGVEADDVIGT
LAYQASQQGMPVLISTGDKDMAQLVDDNITLINTMTNVVMDREGVIEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGDKTATALLQGIGGLSQLYDHLDDIAALSFRGSKTMAKKLVDNK
DNALLSYQLATIKLDVALQETPESLLKTEPNKDELIKLYGQLAFKSWLNELLEGGTGVVE
ADEKAQTSVRSGASPVESEINNAAANIDRSQYQTIFDQATFDIWLDKLKASELFAFDTET
DSLDYMVANLVGLSFAVAEGEAAYVPVAHDYLDAPEQLDREWVLAQLKPLLEDDTKAKVG
QNLKYDASVLARYGIEMKGIKHDTMLASYVYNSVGGKHDMDSLALRFLQHSCISFEQLAG
KGKNQLTFNQIDLNEAAVYAAEDADVTLRLHNRLFANIEQDEKLNAIYQEIEVPLVPVLS
RMERTGVLIDDMKLSAQSQEIAVRLGELEQKAYEIAGQPFNMNSPKQLQTILFEQMGLPV
IKKTPSGTPSTAEEVLQELALDYPLPSVIMEYRGLAKLKSTYTDKLPKMINPHTGRVHTS
YHQAVTATGRLSSTDPNLQNIPIRNEEGRRIRQAFVAPHGYKILAVDYSQIELRIMAHLS
GDQALLDAFQQGKDIHAATAAEIMGVSIEQVSSEQRRRAKAVNFGLIYGMSAFGLAKQLG
IPRGEAQAYMDKYFERYPGVMQYMEDTRSNAAQHGYVETIFGRRLHLPEITSRNVMRRKA
AERAAINAPMQGTAADIIKKAMLLVDQWIQEEGNGRVKLLMQVHDELVFEVEESCLTEIE
SKVQQLMESAAQLNVPLVAEAGHGDNWDQAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggccactattcctgaaaatccattaattcttattgatggctcttcttacctctatcga
gcgtttcatgcctatcctggcaccatgagtaatggtgatatcccaaccaatgcggtctac
ggtgtggtgaacatgctgcgcagcatgatgcgtcagtttgcttctgatcgtattgcggtg
gtgttcgacgccaaaggcaaaacctttcgcgacgatatgtatccggaatataaggccaac
cgaccaccaatgccggacgatctgcgttgccaaatagaacctcttcatcaagttattaaa
gcaatggggcttcccttgattgctattgaaggtgttgaagcggacgatgtgattggtacg
ctggcctatcaagcttctcaacaagggatgccggtgctgatcagtaccggtgataaagat
atggctcagttggtggacgacaacattaccctaatcaacaccatgaccaatgtcgtgatg
gacagagaaggggtcattgagaaattcggtattccacctgaactgatcatcgattatctc
gcgttaatgggtgacaaggtcgataacattcctggcgtgcctggtgtgggtgataaaacc
gccacagctctgctgcaaggtattggtggtcttagtcagttgtacgaccatttggatgac
attgcggcactgagcttccgcggctcaaaaaccatggcgaagaagctggtggacaacaaa
gacaatgcgttgctgtcttatcagctagcgacgatcaagcttgatgttgcattgcaagaa
acgccagaatcccttttaaaaacagagccaaataaagatgagctgatcaagctctatggc
caactggcctttaaatcttggctcaatgagctactagaaggtggcactggtgttgttgaa
gcggatgaaaaagcacaaacctcggtacgcagtggcgcatctccggttgaaagtgaaatc
aacaatgctgcggcgaatattgaccgtagccaatatcaaaccatcttcgaccaagcgaca
ttcgacatttggttggacaagctgaaagcgtcagagctgtttgccttcgataccgaaacg
gacagccttgattacatggtcgctaacttagtgggcctgtcatttgctgtggcagaagga
gaagctgcctatgtgccagtcgcacacgattatctggatgctccggagcaacttgatcgc
gagtgggtgctggctcaacttaagccactgctggaagatgatacgaaggcaaaagttggc
caaaacttgaagtacgatgcctcagtgctggctcgctatggtattgagatgaagggcatc
aagcacgacaccatgctggcttcttatgtgtacaacagcgtgggcggcaagcacgacatg
gatagcttggcactgcgcttcctacagcacagttgtatttcgtttgagcaattggctggt
aaaggcaagaatcaactgactttcaatcaaattgatctaaatgaggctgcggtttatgcc
gccgaagatgcggatgtcaccttgcgtttgcacaaccgcttgtttgccaatattgaacaa
gatgagaaactcaacgccatctatcaagagattgaagtgccattagtgccagtgttatca
cgtatggaacggactggtgtgttgattgatgacatgaaactgtctgcgcaatctcaagag
atcgctgtgcgcttgggagagttagagcaaaaagcgtatgaaatcgcaggccagccattc
aatatgaactcgccaaagcagctgcaaaccatcttgtttgagcaaatgggtttacctgtt
atcaagaaaacgccttcaggtaccccttctacagcagaagaagtgttgcaagaactcgcg
ttggattacccactgccgagcgtcattatggagtaccgtggcttagcgaagttgaaatcg
acttacaccgataagctgccgaaaatgattaacccacacacagggcgcgtgcatacgtct
taccatcaagccgtgacggctactggtcgtttatcgtcaaccgatccaaacttgcaaaat
attccaattcgtaatgaagaaggacgccgtattcgccaagcgttcgttgcgccacatggc
tataaaattcttgcggtcgactattcacagattgaattgcgtattatggcgcacttgtct
ggtgaccaagcactgcttgacgccttccagcaaggcaaagatatccatgcggcaaccgcg
gcagaaatcatgggcgtgtcgattgaacaagtctccagtgagcagcgtcgtcgagccaaa
gccgtcaactttggtcttatctatggcatgagtgcgtttggtttagcgaaacagcttgga
attccgcgtggtgaagcacaagcttatatggataaatatttcgagcgctaccctggtgtc
atgcagtacatggaagacacacgttcaaatgccgctcaacatggttatgttgaaaccatt
tttggtcgtcgtttgcatctaccggaaattacctctcgcaatgtgatgcgtcgtaaagca
gcagaacgtgcggcgatcaacgctccaatgcagggcactgcagcagacatcatcaagaaa
gcgatgttgttggtggatcagtggattcaagaggaaggcaatggtcgagtcaaattactg
atgcaagtacacgatgaactggtgtttgaagtggaagagtcctgtttgaccgaaattgaa
agtaaagtacaacaattgatggaatctgcagcacagttaaatgttcctttggtggcggaa
gctggccatggtgacaactgggatcaagcgcattaa
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