Vibrio vulnificus MO6-24/O: VVMO6_03530
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Entry
VVMO6_03530 CDS
T01415
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vvm
Vibrio vulnificus MO6-24/O
Brite
KEGG Orthology (KO) [BR:
vvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vvm03400
]
VVMO6_03530
DNA repair and recombination proteins [BR:
vvm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VVMO6_03530
Archaeal homologous recombinant proteins
VVMO6_03530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
AAA_5
AAA_16
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ADV88552
LinkDB
All DBs
Position
II:638355..641420
Genome browser
AA seq
1021 aa
AA seq
DB search
MKPLKLTMQAFGPFAEREVIDFTQLGENPLFLINGPTGSGKTSILDAISFALYGETTGNE
RQGMQMRSDLASIHLATEVTLEFLLHGKRYKVIRLPEQEAAKARGEGTTTKKHTAALYLC
QDDEELITSKTAEVKTRVTELIGLNETQFRQVMVLPQGKFRDLLLASSKDREEIFGQLFQ
TEIYKRIEWALKDKANAISKAKEEFDNQIRGALEVADVSDEQALKEALADKKTQLIQWQE
TEKKALERYNSAKQSLSTAKALVEDFNKLALAKTNLDAHLAKNDQMLHLVQKLEQARQAQ
QLDAPYRQWKNALNDVHAQQGKIDELNASLNILLLQSNELEQQCLQAQKNGEQIPQLQQQ
TYELETVKNKLVEKAQFEQEIIRLEEDVQKFAHQLKRVQEHKVVMQQELTSAVDAFEKAK
QQAAEIPRLEARESELKRQISDYEQYQNLNQVLQNLLAQTEQKEQLHRQTKQHWLNAQQS
ADSMELSWHNGQAAILAQRLHQGEACPVCGSLEHPQKAQFVGEPVHKQQVEQAREQEKTA
LAQLNQHHQELELHLAQVKQQQKAIEEKATQLGELLNSPLETLQAQALEIHHTLKQLQGL
DLAQQESHVKQLTERCAKGEEMEKELAQQHISSSATLKEKTQHLAKFSQQIAAQFSHVAQ
VEQEIAQIKQQTTALQTAKETSQKRFDESQQTLASRQSEVKAHGEMLLQTQQRSEQNQAA
WLEALSASSFDDEPHYLALRVEPEQIEQWKREIEQHQQQATRLEQSYHDLQERLKDQQAP
ELEQLELLVTTTEQQYQQNKNELDAVRSLVAKLETVQAKIAELHTHNHRLEEEYKVFGTL
YDVASGKTGSRISLHRFVLGVLLDDVLIQASHRLALMSKGRYQLTRKTEGFKGTAGRGLD
LIVEDSYTGKSRDVATLSGGESFMAALSLALGLSDVVQSYSGGIRLETLFIDEGFGSLDP
ESLDLAIQTLVELQQTGRMIGVISHVSELKEQMQQRIDVIPSRVGSSIRLKSLFSANAST
N
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccactcaaacttaccatgcaggcgtttggtccatttgctgaacgtgaagttatt
gattttacccaactgggtgaaaacccactgtttctaattaatgggcccacaggttcggga
aaaacctctatcttggatgcgatcagtttcgccctttatggcgaaaccacaggcaatgag
cgccaaggtatgcagatgcgttcagatttggcctctatccatctagccacggaagtgacg
ttagagtttctgctacacggaaaacgctataaggtaattcgcctgcctgagcaagaggcg
gcaaaagcgcgcggtgaaggcaccaccaccaaaaaacacactgccgcgctttatctttgc
caagatgacgaagagctgatcaccagcaaaacggctgaagtgaaaacgcgagtgacggaa
ttgattggcttgaacgaaacgcagtttcgccaagtcatggtgttgccacagggaaaattt
cgcgatttgctgctggcgagttccaaagatcgtgaagagatttttggccaactgttccaa
accgaaatttacaaacgcattgaatgggcgctaaaagacaaagccaatgcgattagtaaa
gccaaagaagagtttgataatcaaattcgtggggcgctagaggtggcggatgtcagtgat
gagcaggcgctcaaagaggcgcttgcagacaaaaaaacgcaactgatacagtggcaagag
acagagaaaaaggctctcgagcgttacaattcggctaagcaatccctttccacggctaag
gctctggtggaggattttaacaaactggctttggccaaaacgaatttagatgcccatttg
gcgaaaaatgatcagatgcttcacttggtgcaaaagctggaacaagcacgacaagctcag
cagcttgacgcaccgtatcgccagtggaaaaacgcactcaatgatgttcatgctcagcaa
ggcaaaattgacgagcttaacgcatcattaaacatactgttgttgcagagcaatgagctg
gaacaacagtgtttgcaggcgcagaaaaatggcgaacaaattcctcagctacaacagcaa
acgtatgaattagagacggttaaaaacaagctggtggaaaaagcccagtttgaacaagag
atcattcgtcttgaagaagacgtgcagaaatttgctcatcaattaaaacgcgtgcaagaa
cataaagtcgtgatgcagcaggagctgacgtctgccgttgatgcgtttgaaaaggcaaag
cagcaagcggcagagataccgcggcttgaagcgcgagagagtgagctaaagcgtcagatc
agtgactatgagcaataccaaaaccttaatcaagtccttcagaatttactcgcgcaaact
gaacaaaaagagcagttacatcggcaaaccaagcagcattggctcaacgcccaacagtct
gcggatagcatggaactgagttggcataatggccaagctgctattttggctcagcgcctt
catcaaggggaagcttgcccagtttgtggtagcctcgaacacccgcaaaaagcgcagttt
gtcggtgagcctgtgcataaacagcaagtagaacaggcccgtgagcaggaaaaaaccgcg
ctcgcccagctcaatcaacatcaccaagagctggagctgcaccttgcacaagttaagcaa
cagcagaaagcgattgaggaaaaagcaacacaactcggtgagctgcttaacagcccgtta
gaaaccttgcaggcgcaagctcttgaaatccatcacacactcaaacagctgcaagggttg
gatctcgctcagcaagaaagtcatgttaaacaactgaccgagcgctgtgcgaaaggcgag
gagatggaaaaggaactcgctcagcaacatatttctagcagcgcaaccttgaaagaaaaa
acgcaacacttagcaaagttcagccaacaaattgccgcgcaatttagccatgttgcccaa
gttgagcaggaaattgcgcagatcaagcaacaaacgacggctttacaaacggcaaaagag
acgagccaaaagcgttttgatgagagtcaacaaacgcttgcctcgcgtcaaagtgaagtt
aaggcacacggtgagatgttgctgcagactcagcagcgcagtgaacaaaaccaagctgca
tggttggaggcgttgtctgcatcgtcatttgacgatgaaccgcactatttggcgttgcgt
gtcgagccagaacagatcgaacaatggaaacgtgagattgagcaacatcaacagcaggcg
acacgtttagagcagagttatcacgaccttcaagagcgtttgaaagatcagcaagcgccc
gagcttgagcaattagagctgttggtgacaacgacagaacagcagtatcaacagaacaaa
aatgagttggatgcggtgcgttcactggtggcgaagcttgagaccgtgcaagcgaagatc
gctgaactgcacacgcataatcatcgccttgaagaagagtacaaggtctttggtacactc
tacgatgtggcaagtggcaaaacaggcagtcgtattagcttgcaccgttttgtgttaggg
gtgttgctggatgatgtactgattcaagcttcgcatcgtttggcgctaatgagtaaaggc
cgctaccagttaacgcgaaaaaccgaaggctttaagggcacggcgggtcgtgggctcgat
ctgattgtggaagacagctacaccggaaaatcgcgtgatgtcgccacactctctggtggt
gaatcctttatggcggcactttccctagcactgggtttatcggatgttgtccagtcatac
agtggtggcattcgtttagagactttgtttattgatgaaggctttggtagcttggatcct
gaatcactcgatctcgccattcaaacgctggtggagttgcagcaaacaggccggatgatc
ggggtaatttcccatgtgtcagagttgaaagagcagatgcaacagcggattgacgtgata
ccgtcgcgagtgggctcttccattcgtcttaagtccttattttccgctaatgcctcaaca
aattaa
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