Vibrio vulnificus MO6-24/O: VVMO6_03633
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Entry
VVMO6_03633 CDS
T01415
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
vvm
Vibrio vulnificus MO6-24/O
Brite
KEGG Orthology (KO) [BR:
vvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vvm03009
]
VVMO6_03633
Enzymes [BR:
vvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
VVMO6_03633
Ribosome biogenesis [BR:
vvm03009
]
Prokaryotic type
rRNA helicases
VVMO6_03633
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
Helicase_C_2
AAA_30
AAA_22
PRAI
Motif
Other DBs
NCBI-ProteinID:
ADV88655
LinkDB
All DBs
Position
II:complement(742988..744367)
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AA seq
459 aa
AA seq
DB search
MTAPFNTLSLKPELLSTLDTLGYTEMTPIQAQSLPLVLAGKDVIGQGKTGSGKTATFSLG
LLSNLNVSRFRVQSLVLCPTRELADQVATEIRTLARGIHNIKVLTLCGGMPMGPQILSLE
HGAHILVGTPGRILDHLSKGRIDLAELNTLVLDEADRMLEMGFQDAIDAIIDAAPTQRQT
LLFSATFPEQIETIASKVMQNPEMVKVESTHQKSTIEQRFYQLESTEERDNALEALLLTH
RPESTVVFCNTKKEVQNVTDELNHRRFSVIELHGDMEQRERERALTMFANKSISILVATD
VAARGLDVDNLDAVINFELSRDPEVHVHRIGRTGRAGAKGIAISFFSEKELYRVERIEEY
MGIDVHPAKLPQPENSKPYYPSMRTIQILGGKKQKVRAGDILGSLTKEAGIDGKLIGKIN
ILPMVSYVAIDNSVAKIAEQQLQNGKMKGRNFKARIMKG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgactgcaccatttaacactctttctctcaagcctgaactactatcgactcttgatacc
ttgggctatacagagatgacgccaattcaagctcagagcctaccattagtgctcgctgga
aaggatgtgattggtcaaggaaaaacaggttcagggaaaaccgccaccttttctttgggt
ctgctgagcaacctgaatgtctcgcgctttcgcgttcaatcgcttgttctttgccctaca
cgtgaattggcggatcaagtcgcaacggaaattcgtactttggcgcgtggcattcacaac
attaaagtgctcacgttgtgtggtggtatgcctatggggccacaaattctttcgttggaa
catggtgcacacatcttagttggcacaccggggcgcattctcgatcacctaagcaaaggc
cgtattgatcttgcagaactgaatacgctagtgcttgatgaagccgacagaatgttggaa
atgggcttccaagatgcgattgatgccatcattgacgccgcaccgactcaacgccagacg
ttacttttcagtgcgaccttcccagaacagattgaaaccatcgcaagcaaagtgatgcag
aatccggaaatggtgaaagtagagtctacacaccaaaagagcaccatcgaacaacgcttt
tatcagctcgagagcaccgaagaacgtgacaacgctttggaagctctgctgcttacgcac
agacctgaatctaccgtggtcttttgcaataccaagaaagaagtgcaaaacgtcaccgac
gagctgaaccatcgtcgcttcagcgttatcgaactgcacggtgacatggaacagcgtgaa
cgtgaacgcgcgttaaccatgtttgccaacaaaagcatttctattttggtcgcaaccgac
gttgccgctcgcggtttggatgtggacaacctagacgccgtgattaactttgagctttct
cgtgaccctgaagtgcatgttcaccgcattggtcgtactggccgtgcgggtgcgaaaggg
attgcgatcagcttcttcagtgagaaagagctgtatcgagtagagcgtattgaagagtac
atggggattgatgtgcatccggccaaactgcctcaaccggaaaactctaaaccttactac
ccttcaatgcgtacgattcaaattttgggtggcaaaaagcaaaaagtccgtgctggcgat
atcttaggcagcctaaccaaagaagccggaattgatggtaagttgattggtaaaatcaac
atcttacctatggtctcctatgttgctatcgataactctgtggccaaaatcgccgaacag
caactgcaaaacggcaaaatgaaagggcgtaactttaaagcccgaattatgaaaggttaa
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