Vibrio vulnificus MO6-24/O: VVMO6_03724
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Entry
VVMO6_03724 CDS
T01415
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
vvm
Vibrio vulnificus MO6-24/O
Pathway
vvm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VVMO6_03724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvm03019
]
VVMO6_03724
Enzymes [BR:
vvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
VVMO6_03724
Messenger RNA biogenesis [BR:
vvm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
VVMO6_03724
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_19
P-loop_SecA
Helicase_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADV88746
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All DBs
Position
II:860883..862139
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AA seq
418 aa
AA seq
DB search
MTNTFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLP
LIQMLSRQSREETAPKHPRALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIRVQ
QEQLAKGVDILIATPGRLLDHLFTKKTSLNQLQMLVLDEADRMLDMGFLPDIQRIMKRMP
EERQTLLFSATFETRVKALAYRLMKEPVEVQVAAANSTADTVKQMVYPVDKKRKSELLAY
LIGSRNWQQVLVFTKTKQGSDALVSELKLDGIKAASINGDKSQGARQKALDDFKSGKVRA
LIATDVAARGLDIAQLEQVVNFDMPYKAEDYVHRIGRTGRAGQTGLAVSFMSRDEEYLLQ
AIENLLDTRLPQEWLAGFEPSEKENYVEDTPSKRTSRSAEKRKLKQKLKIHQGRGKKR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatactttcattgagcttggacttgactcttcgttaagcgatcatctttctcag
ctaggatttaacacaccaacaccaattcaacagcaagcgattccacatcttttgcaaggt
agagatgtgctggctgccgctcaaacagggacaggaaaaaccgccgcttatggcttgcca
ctgatccaaatgttgtcacgacagtcgcgagaagaaacggcacccaaacatcctagagca
ctgatcttagcgccaacccgagagctggcgcagcaagtgttcgacaatttgaaacagtat
gcgcaacacactgagttggctatcgttaccgtatacggtggaaccagtatccgtgttcaa
caagaacaattggcaaaaggtgttgatatcctcattgcgacgcctggacgtctattggat
catctttttaccaagaaaacctcattgaaccagttgcaaatgctggtgttagacgaagcc
gatcgcatgttggatatgggctttttgcccgacattcagcgcattatgaaaagaatgcct
gaagagcgtcaaacgctgctgttttccgctacgtttgaaacacgtgtcaaagcattggct
tatcgtttaatgaaagagcccgtcgaagttcaagttgccgctgccaacagcaccgccgac
accgttaagcagatggtgtatccggtcgacaaaaaacgcaaaagcgagttgttggcgtat
ctcattggctctcgtaattggcagcaagtactggtatttaccaaaactaagcaaggcagc
gatgctttggtgagtgaattaaagctggatggcatcaaggccgcttccatcaatggcgat
aaatcgcaaggtgcacgtcagaaagctctggatgattttaaatcgggtaaagtacgcgcg
ttgatcgccaccgatgttgccgcacgcggtttggatattgctcagctagagcaagtcgta
aacttcgatatgccttacaaggcagaagattacgtgcaccgaattggccgaacggggaga
gcagggcaaacggggctcgcagtatcttttatgtcacgagatgaagaatacttgctgcaa
gcgattgaaaatctgctggatacccgtttacctcaagaatggttagcgggatttgagccc
agtgaaaaagagaactacgttgaagatacacctagcaagcgcactagtcgttcagcagaa
aaacgtaagcttaagcaaaagttaaaaattcaccaaggccgtggtaaaaagcgctga
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