Vibrio vulnificus MO6-24/O: VVMO6_04309
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Entry
VVMO6_04309 CDS
T01415
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vvm
Vibrio vulnificus MO6-24/O
Pathway
vvm03030
DNA replication
vvm03430
Mismatch repair
vvm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VVMO6_04309
03430 Mismatch repair
VVMO6_04309
03440 Homologous recombination
VVMO6_04309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vvm03032
]
VVMO6_04309
03400 DNA repair and recombination proteins [BR:
vvm03400
]
VVMO6_04309
Enzymes [BR:
vvm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VVMO6_04309
DNA replication proteins [BR:
vvm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VVMO6_04309
DNA repair and recombination proteins [BR:
vvm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VVMO6_04309
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ADV89331
LinkDB
All DBs
Position
II:1530557..1531273
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AA seq
238 aa
AA seq
DB search
MIKKWFKRWDTMPSQEQIRQQIVVESAWPEALQNYLNTPLIAQETPLHQVSFLALDFETT
GLDAKHDKILSIGMVDLTLEGINLSSAEEILLNHGAYIKAESARINGLTPQALEQGCSLE
QGMMRLFERAQGKVLLAHSAIIEQGFLQTFAQQHFQLAKLPCHFVDTLQIEKRFSYAGKS
GQRSSFQLDDLRRCYHLPDYHSHSAASDALACAELFIVQSKKLDLNKQRQLNTVLCSI
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgataaagaaatggttcaagcgctgggacaccatgcccagccaagaacagatacgccaa
cagatcgtcgttgaatcggcgtggcccgaagcgctgcaaaactacctgaatacgccgctc
attgcacaagagacgccacttcatcaggtctcgtttcttgctttggattttgaaaccact
gggcttgacgcaaagcacgataaaatactctccatcggtatggtggatttgacgctcgaa
ggcattaacctctcaagcgcagaagagatcttgctcaaccatggcgcgtacattaaagcc
gaatccgcgcgcattaatggcctaacgccacaggcgctggagcaaggttgctcgctagag
caagggatgatgcgtttatttgaacgtgcgcaaggcaaagttctgctcgcgcacagcgca
atcattgaacaaggttttctccaaacctttgctcaacaacattttcagcttgccaaattg
ccttgccacttcgtggatacactgcaaattgaaaagcgctttagctacgcagggaaaagc
ggccaacgcagcagttttcaacttgatgatttacgacgttgttatcacttacccgattac
cattctcattctgccgccagtgatgccttggcctgtgcggagttgtttatcgtgcaaagc
aaaaaactcgatctgaataaacaacggcagttaaacacggttttgtgctccatataa
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