Vicia villosa (hairy vetch): 131593266
Help
Entry
131593266 CDS
T09680
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03013
Nucleocytoplasmic transport
vvo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131593266
09122 Translation
03013 Nucleocytoplasmic transport
131593266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131593266
03041 Spliceosome [BR:
vvo03041
]
131593266
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
131593266
Spliceosome [BR:
vvo03041
]
Complex C
Other components
EJC/TREX
131593266
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
131593266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
131593266
NCBI-ProteinID:
XP_058721614
LinkDB
All DBs
Position
LG3:complement(198980205..198989187)
Genome browser
AA seq
611 aa
AA seq
DB search
MEVFKRAILQPGPPESFALQTVQEVIKPQKQTKLAQDENLFLENILRLLLQEFVSAAFQC
GEKVMQYGQSIDANETAQGHIPRLLDIVLYLCEKEHIEGGMIFQLLEDLTEMSTMKNCKD
IFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSE
RSALNIKGVFNTSNETKYEKEPIEGICIDFNFYETFWGLQEYFSNPASISHSPIRWKKFT
SSLSVVLNTFEAQPLSDEEGDANNLEEEAVNFSIKYLTSSKLMGLELKDPSFRRHVLVQC
LILFNYLKAPGKGDKDLPSENMKDEITSCEERVKKLIELTPPKGKEFLHKIEHILEREKN
WVWWKRDGCPPYEKQPAEKKAVPDGSKKRKPRWRMGNKELSQLWKWSDQNPSALTDPQRV
QTPSIMEYWKPLADDMDPSAGIEAEYHHKNNRVYCWKGLRLSARQDLEGFSKFTEYGIEG
VVPLELLPPDVRSKYQAKPNDRSKRSKKDEAKNNAHQAEENQTAATPATEMDGESIRTDT
TATPMEFDAVPIPGSQGGTSTSDELQKNSPDTDNDPEAGQLEADAEVEAGIIDENDADAD
ADADVDLDASG
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgtttaaaagggccatactacagcctggtcctcctgaaagttttgctttgcag
actgttcaagaagtaataaagccccagaaacaaacaaaattggcccaagatgagaatctg
ttcctagaaaacattctccggctgctacttcaagaatttgtgtcggcagcatttcagtgt
ggggagaaagtaatgcaatacgggcaatcaattgatgccaatgaaactgcccagggccac
attcctcgccttcttgatatagtgctatatctgtgtgagaaggaacacattgaaggtgga
atgatttttcagctgttggaagacttaacagaaatgtctacaatgaaaaactgcaaggat
atttttggctatatagagagtaaacaagatatattgggaaagcaagaacttttcgctcga
ggaaaacttgtgatgctgagaacctgcaatcaacttcttcgccgcctttcaaaggcaaat
gatgtggtcttttgcggaagaattctcatgtttctggctcatttctttcctttatcagag
agatctgccttaaatatcaagggagtttttaacacatcgaatgaaacaaaatatgagaaa
gaacccatagaaggcatatgtattgatttcaatttttatgaaaccttttggggcttacag
gaatatttttctaaccctgcttctattagtcattctccaataaggtggaaaaaattcacc
tccagtttgtcggttgtactgaatacatttgaagcacaacctttaagtgatgaagaagga
gatgctaataatttggaagaagaggcagttaactttagtataaaatatctcacaagcagt
aaactaatgggtctagagttgaaggatccaagttttcgacgtcatgttcttgtgcagtgt
ctcatattgttcaattatttgaaggcccctggaaaaggtgacaaggatttgccatctgaa
aacatgaaagatgagattacatcatgtgaagaacgtgttaaaaaacttattgaactgact
ccacccaaagggaaagagttccttcacaaaatcgagcatatattagaacgagaaaagaat
tgggtatggtggaaacgtgatggctgcccaccatatgagaaacaacctgcagagaagaaa
gcagtaccagatggttcgaagaagcgtaagccaagatggagaatgggcaacaaagaactg
tctcagttatggaagtggtcagatcaaaatccgagcgctttaactgatcctcagcgtgtt
caaacaccttcaattatggagtactggaaacccttggctgatgatatggatccttctgct
ggaatagaagctgaatatcatcacaagaataaccgggtttattgttggaaaggtcttcgg
ctttcagcacggcaagacttggaggggttttctaagtttactgaatatggaattgaagga
gttgtaccactagaacttttgccacccgatgtccgatctaaataccaagctaaaccaaat
gacagaagtaaacgtagtaaaaaggacgaggcaaaaaacaatgctcatcaagctgaggaa
aatcagactgctgctacacctgcaaccgagatggatggtgaaagcattagaacagatacc
acagcaacacctatggaatttgatgctgttccaatccctggttctcaaggtggaacctca
acttctgacgaacttcagaagaatagcccagatactgataacgatccagaagcgggtcaa
ctggaagcagacgctgaagttgaagccggaattatagatgagaatgacgctgatgccgat
gccgatgctgatgttgatttagatgcaagtggctga
DBGET
integrated database retrieval system