Vicia villosa (hairy vetch): 131595022
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Entry
131595022 CDS
T09680
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03030
DNA replication
vvo03420
Nucleotide excision repair
vvo03430
Mismatch repair
vvo03440
Homologous recombination
vvo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131595022
03420 Nucleotide excision repair
131595022
03430 Mismatch repair
131595022
03440 Homologous recombination
131595022
03460 Fanconi anemia pathway
131595022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vvo03000
]
131595022
03032 DNA replication proteins [BR:
vvo03032
]
131595022
03400 DNA repair and recombination proteins [BR:
vvo03400
]
131595022
Transcription factors [BR:
vvo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131595022
DNA replication proteins [BR:
vvo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131595022
DNA repair and recombination proteins [BR:
vvo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131595022
MMR (mismatch excision repair)
131595022
DSBR (double strand breaks repair)
HR (homologous recombination)
131595022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF936
DUF223
zf-like
RMI1_C
Motif
Other DBs
NCBI-GeneID:
131595022
NCBI-ProteinID:
XP_058723225
LinkDB
All DBs
Position
LG4:complement(102335330..102338790)
Genome browser
AA seq
636 aa
AA seq
DB search
MSVNLTANAIPAIISGDINAKPLVQILEITSVVSNKNSQQQRYRVLLSDAVSSHHAMLAA
QLNDLVTTGRIKNGSIVQLLEYICTIFQNRKIIMVLNMESIIPDCEIIGSPKPFVDSELP
VQKALHDNTVGSSVNNNNNNYNNNRNILATQNTGSTNVQNFRPTIQPSYKPPPVYKGRGA
VMKNEAPARTIPIAALNPYQGRWAIRARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEI
RVTCFNAIVDRFYETIEVGKVYLISKGSLKPAQKNFNHLKNEWEIMLDLNSTVELCPDED
GSIPKQQFSFRPISDIENVESNAILDVIGVVTSVNPSVPILRKNGLETLRRILNLKDNSG
RSVELTLWGEFCNREGQKLQEMVDSGVFPILAVKAGKVNEFSGKSLGSISTTQLFINPDF
PEAQSLRAWFDQVGKDSASLSISKDITHGGLKNEIRKTVSQIKDEGLGRSDKPDWITIRA
AITFMKTDTFCYTACPLMIGDRQCNKKVTRSGDTRWQCDRCNQEFEECDYRYLLQAQIQD
HTGLTWVTAFQEAGEEIMGYPAKELYALKYEQEDEERFGEIVKSRLFNHFVFKLKIKEEL
YGEEQKVKSTVVKADKVNYSAESRYMLDLISKFCRK
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgaatctcaccgcgaacgccattccggcgataatcagcggcgacatcaacgcg
aaaccgctcgttcaaattctcgagattacatcagtcgtaagcaacaaaaactctcagcag
cagcggtaccgcgttctcctctccgacgccgtttcatcgcaccacgctatgctcgctgct
caactcaacgacctagtcaccaccggacgtatcaagaatggctccatcgttcagcttctc
gaatacatttgcactattttccagaatcgcaagattattatggtcctcaacatggaatcc
ataatacctgattgtgagatcattggaagtccaaagccatttgtggattcagaattacca
gttcagaaagcattgcatgataacactgtgggaagttcggtcaacaacaacaataacaat
tataataataataggaatattttggctactcaaaatactggtagtactaatgtgcagaat
ttcaggccaacaattcaaccttcatacaaacctcccccggtttacaaaggccgcggtgct
gttatgaaaaacgaggcgccggcgcgaacaataccgatagctgctttaaatccatatcaa
ggtaggtgggcaatcagggcaagagttactgctaaaggggatttgcgccggtataacaat
gctcgtggagatggaaaagtcttctcgtttgatctccttgattctgatggtggtgagatc
cgcgtaacatgctttaatgctattgttgaccgcttctatgaaacaatcgaggttggcaaa
gtttacttgatatccaaaggtagcttgaaacctgcacagaagaatttcaaccatttgaag
aatgaatgggaaattatgctggatttaaattccacagttgagctttgcccagatgaggac
ggttcgatacctaaacagcaattctccttcaggcctatcagtgacattgagaatgtcgaa
agtaatgctatccttgatgttattggggttgtgacatctgtgaatccttcagttcccatc
ttaaggaagaatggattggaaacgctgcgaaggattttgaatctgaaggacaattctggc
agaagtgttgagctaacactttggggtgaattctgcaacagggaaggacaaaagctgcaa
gagatggtagattccggtgttttccccattttggcagtaaaggctgggaaggtgaatgaa
ttcagtggaaagtctttaggctctatttccactactcagcttttcataaatccagatttc
cctgaggctcaaagcttacgagcctggtttgatcaagtcggaaaagattctgcttctctg
tccatttctaaggacattactcatggaggactgaagaatgagatacgcaaaactgtgtct
caaatcaaagacgaaggtctggggcgttcagacaagccggactggataacgataagggca
gccataacattcatgaagactgatacattttgttacacagcttgccctttgatgattgga
gatagacagtgcaataagaaagtgacaaggtcaggagacaccagatggcaatgtgataga
tgcaaccaggaattcgaggaatgcgattatcgttaccttctccaagctcaaattcaggat
catactggattaacttgggtaacagctttccaggaagcaggggaagagattatggggtac
ccagcaaaagagctgtatgcactgaagtatgaacaagaggacgaagaaaggtttggcgag
atagtcaagagtagactcttcaatcactttgtatttaagctgaaaatcaaagaggaatta
tatggggaagaacagaaggtgaagagcacagtagttaaggcagataaggtgaattattct
gcagagagtaggtacatgcttgatttgatttccaagttctgtaggaagtaa
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integrated database retrieval system
