Vicia villosa (hairy vetch): 131595363
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Entry
131595363 CDS
T09680
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131595363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vvo03019
]
131595363
Messenger RNA biogenesis [BR:
vvo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131595363
mRNA degradation factors
5'-3' decay
Decapping complex
131595363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EDC4_C
Ge1_WD40
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
DUF2806
GerPC
CelTOS
Motif
Other DBs
NCBI-GeneID:
131595363
NCBI-ProteinID:
XP_058723686
LinkDB
All DBs
Position
LG4:143312423..143320433
Genome browser
AA seq
1405 aa
AA seq
DB search
MASSGNPNQNQNQQQQQQQTQFDLQKLFKGPTNQNPLPPISSNLNSSPSFPSPSLSAPPP
SSYPTPSSSYPPPTGTYPYHHPHYLPFPNLHHQQQENPLILQHNPQMHAPQRPIFQPPSS
SSPSSPHLPASPNPNTTSGARLMALLGTQNPPSNQEASPPVSEFSVSSNPASGSNVASPQ
STPTRMLSTKLPKGRHLKGENVVYDIDVKLPGETQPQLEVTPITKYASDPGLVLGRQIAV
NRSYICYGLKLGAIRVLNINTALRYLLRGHTQRVSDMAFFAEDVHLLASASTDGRIFIWK
INEGPDEEDKPQITGRVILAIQILGESESVHPRVCWHPHKQEILIVAIGNRILKIDTMKA
GKGETFSAEEPLKCNIDKLIDGVHLIGKHDDNITELSMCQWMKSRLASASADGTVKIWEE
RKATPLAVLRPHNGKPVNSVTFLTAPHRPDHIVLVTAGPLNQEVKIWVSGYEEGWLLPSD
SESWICVQTLDIRSSSEANPEDVFFNQVVALPRAGLVLLANAKKNTIYAVHIEYGPSPTA
TRMDYISEFIVTMPILSLIGTSDSLPDGDHLVQIYCVQTQAIQQYGLNLSQCLPPPLDNV
EIEKTEPSVSRAWDGSTDLETVNTQQVLMSTSENVVNLSSDVHGLPEASVSDTEVKPNDL
SSHNGFEHVHAAPPPLPPSPRLSRRLSGSKSSSNILGTSSTSAADHGNEPTNIDSSAEQR
VESEKDNVADVPAPSDNLQESDKVVQNDVSDSPTIFKHPTHLVTPSEIFSKSALSSANSN
TSQGMNVQDVAHGDAEKSEVEVKVVGENETGSNQENTEYDRDRGSLPDVAEKKEKLFHSQ
ASDLGIRIARDTYNIEGVRQADRDSYNIKGVRQADRDTYNIEGDLQADSNNTIEAPDRDT
YNIEGVLQDTNKEAPVNIKESEAVAATSQPPAPSTKGKKQKGKGSQVSGTSSASPSPFNS
ADSANDQGGNTGGSSTESTLPQLSSMQEMMGQLLSMQKEMQKQMNVMVSAPVTKEGKRLE
GSLGRSMEKVVKANADALWARIQEENAKQEKLERDHVQQMTNMISNYINKDMSSLLEKII
KKEISSIGTTITRSLSQNIEKAITTAVNESFQKGVGDKAMNQLEKSVSSKLEATVARQIQ
VQFQTTGKQVLQEALRTSVEATLVPAFEKSCKAMFEQIDGTFQNGLLNHTNAIQQQYDST
HSPLAITLRETINSASSITQTLSGQLADGQRKLLEMVANSKVAADPFVAQINNGLHEMTE
DPTKELSRLINERKFEEAFTGALHRSDVSIVSWLCSQAGLTGILSMTPMPLSQGVLLSLL
QQLSCDINTDTPRKLQWMTDVAAAIDPEDTRIAAHVRPILDQVYRTLGHHRSLPTNSPSE
ASTIRLLMHVINSVLLSCKPLQRMS
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctggaaatccaaatcaaaatcaaaatcaacagcaacaacaacaacaaacc
caatttgatttgcagaaacttttcaaaggaccaaccaatcaaaatcctctaccaccaatt
tcatcaaatttaaactcttctccttctttcccttcaccttcactttctgcaccccctcct
tcttcttaccctaccccctcttcatcataccctccaccaactggtacttacccttatcat
catcctcactatctcccttttccaaatcttcatcatcaacaacaagaaaaccctcttatc
cttcaacacaaccctcaaatgcatgcacctcaaagacccatttttcaacccccttcttct
tcctctccttcctcaccccaccttcctgcatctccgaatccgaatactacctctggtgca
cgcttaatggctttgttgggcacacaaaaccctccttcaaatcaagaagcttcaccacca
gtttctgaattttcagtgtcatcaaaccctgcttcgggttcgaatgtggcaagtcctcag
tctacacctacgaggatgctgagcacaaagcttccaaagggtaggcatttgaaaggagag
aatgttgtttatgatattgatgttaagttgccaggggaaacgcagccccagcttgaggtt
accccaattacgaagtatgcatctgatcctggccttgtgcttgggagacaaattgcggtg
aatagatcttatatatgctatggactcaagcttggtgcgattcgggttcttaatatcaat
actgcattgagatatttgcttcgaggtcatactcagagagtatctgacatggctttcttc
gctgaggatgttcacctgttagccagtgctagcactgatgggagaatttttatatggaaa
atcaatgagggccctgatgaggaagataagcctcaaattactggaagagttatcctagcc
attcagatattaggagagagtgagtcagttcatccgcgagtatgctggcatccccataaa
caagagattttaattgttgctattggaaaccggatcctcaaaatcgacactatgaaagct
ggaaagggtgaaactttttctgcagaggagcctctcaaatgtaacattgataagttgatt
gatggcgtgcaccttatcggtaagcatgacgacaatatcactgagttgtcaatgtgccaa
tggatgaagagtcgattagcttcagcatcagcagatggtacggtcaagatatgggaagaa
cgtaaggcaacaccacttgctgttttaagaccacataatggtaaacctgttaattctgtg
acgttcttaactgctcctcaccgcccagaccacatcgtccttgtcacagcggggccgcta
aatcaggaagtgaagatatgggtatctggttacgaggaaggctggttattgcctagtgat
tctgaatcatggatttgtgttcagactttggatataagaagttcttctgaagccaaccct
gaggatgtattcttcaatcaagttgtagcgctgcctcgcgctggtttggttttgctagca
aatgccaagaaaaacacaatttatgctgtgcatatagagtatggacccagtccaactgct
actcgcatggattatatttccgagttcatagtcacaatgcctatactaagccttatcgga
actagtgatagtttaccggatggagatcatcttgtgcagatatattgtgtccaaacacaa
gctattcaacagtacggactcaatttatcacaatgtttgcctccaccactggacaatgtt
gagattgaaaaaacagaaccgagtgtatctcgtgcttgggatggatctactgatctggaa
actgttaacacacagcaagttcttatgagcacttctgaaaatgtcgtgaatttgtcttcg
gatgttcatggtttgcccgaagcttcagtatcagatactgaggtcaagccaaatgattta
tcttctcataatggttttgaacatgtccacgctgctccacctccacttcctccgagtcca
agactgtctcgcaggttatctggttccaaaagttcttctaatattttagggaccagctca
acaagtgccgctgatcacggcaatgagccaacaaatattgattcttctgcagaacaaagg
gtagagtctgaaaaagataatgtggccgatgtgcctgcaccgagtgacaatttgcaagaa
agtgacaaagttgtacaaaatgatgtttctgatagccctacaatatttaaacacccaact
catttggtaactccatctgagatattctctaaatctgctttatcttctgctaattctaat
acctctcaaggtatgaatgttcaagatgtggcacatggtgatgcagaaaaatcagaagta
gaggttaaagtagtgggtgagaatgagacaggttctaatcaagaaaacaccgagtatgac
agagacagaggctcactccccgatgttgctgagaagaaagagaagctattccattctcag
gcttctgatcttggcattcggatcgccagagacacctataatatcgagggagttcgtcag
gctgatagagactcctataatatcaagggagttcgtcaagctgatagagacacctataat
atcgagggagatcttcaagctgatagtaataatactattgaagcacctgatagagacacc
tataatattgagggagttcttcaagacacaaataaggaggcacctgtaaacatcaaggaa
tctgaagctgtggctgcaacttcgcagcctccagcaccttccacaaaaggtaaaaaacag
aaaggtaaaggctctcaagtgtctggaacatcttccgcttctcctagcccttttaactcc
gcggattcggctaatgatcaaggtggaaatacaggaggctcttccacggagtctacttta
ccacaattatcttctatgcaagagatgatgggccagctattaagcatgcaaaaagaaatg
cagaagcagatgaatgtgatggtttcggccccggttactaaagaaggcaaaagattagaa
ggctcgttgggtagaagcatggagaaggtagtcaaggctaatgccgatgctttgtgggct
cgcatacaagaagaaaatgcaaagcaagagaaactagagcgagaccatgtgcagcaaatg
acaaatatgatctccaattacataaacaaggatatgtcatctctattggagaaaatcatc
aagaaggaaatatcttcaattggaacaaccattactcgttcacttagtcaaaatatagag
aaagcaataacaacagccgttaacgagtcattccagaagggggtgggagacaaagcaatg
aatcaactagaaaagtcagtaagttcaaaacttgaagctacggtggctaggcagatacaa
gtacaatttcaaactactggcaagcaggttcttcaggaagcacttaggactagtgttgaa
gctacattagttcctgcttttgagaagtcttgcaaagctatgtttgagcaaattgatggc
acatttcagaatggacttttgaaccatacaaatgctattcaacagcagtatgattctact
cattctccgcttgccatcactttgagggaaacaattaattcagcatcatcgatcactcaa
actttgagcgggcaattggctgatggccaacgtaaactgttggaaatggtagcgaactcc
aaagtggctgccgatccttttgtagcacaaatcaacaacggcttgcatgagatgaccgag
gatcctaccaaagaactatcaaggttaataaatgagcggaaattcgaggaagcatttact
ggagctcttcatagaagcgacgtttcaatagtttcttggttatgttctcaggctggttta
actggtatattgtcgatgacaccgatgccattaagccaaggagtacttttatctcttcta
caacaattatcctgtgacatcaatacagacacaccgagaaaattgcaatggatgacagat
gtggctgctgctatagacccggaagatacaaggattgcagcgcacgtgcggccaatactg
gatcaagtgtaccgtacactaggccatcatcgtagtttaccaactaattccccttcagaa
gctagcacaatccgccttctcatgcatgtcataaactcagtgttgttgagctgtaaacct
ttgcagagaatgtcttga
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integrated database retrieval system
