Vicia villosa (hairy vetch): 131595403
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Entry
131595403 CDS
T09680
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
vvo
Vicia villosa (hairy vetch)
Pathway
vvo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vvo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131595403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vvo03021
]
131595403
Transcription machinery [BR:
vvo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
131595403
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
PAS_12
DUF1258
Motif
Other DBs
NCBI-GeneID:
131595403
NCBI-ProteinID:
XP_058723728
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All DBs
Position
LG4:145659310..145667864
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AA seq
537 aa
AA seq
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MTMDLQLKSSCSGCGTTEGLYGSNCKHMTLCAACGKTMAENRSKCYDCGATVTRLIREYN
VRASSANDKNYFIGRFMTGLPDFSKKKSAENKWSLKKEALKIRQMTDSLREKYKNRPWHL
EDETGQSQFQGHLEGSQSATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRKKTADGYQRWMMKAPTAFGEHAKLDEKENNAGGGRGRKKTGDDDDEGPSSDKGEEDE
DEEVDRKSRLGLNKKPAYDEDDEEGPRGGDHDEDDYDVEKGDDWEHEEIFTDDDEAVGND
PEEREDLAPEVPAPPEIKQDEEDEDEDNEEGGGLSKSGKELKKLLGRSGGLSDSEADDDD
DDDDDMDDEGSVPPATATKQKEPKEEPVDNSPSKPTATGSARGTPTSKSSKGKRKANEET
KPSNNVPPKKVKTENEQKPSEKDLNGSTAKTSAPPRATPPPSSNTGSSNAATGPVTAEEI
TAVLMQRAPLTTQELVGKFKARLRCSEDKKAFAEILKRISKIQKSTNGASYVILRKN
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggacctgcaattgaaatcatcctgtagcggatgcggaacaaccgaaggtctc
tacggaagcaattgcaagcacatgactctgtgcgccgcctgtggcaaaaccatggctgaa
aatcgctccaaatgctacgattgcggcgcgaccgtcactcgtttgattcgagaatataat
gttcgtgcgagttctgccaacgataaaaactatttcatcggaaggtttatgactggcttg
cctgatttttcgaagaagaaaagtgctgaaaataagtggtctctgaagaaggaggcattg
aagattcgccaaatgactgattctttgcgggagaagtacaagaacaggccttggcacttg
gaggacgaaacaggccagtcccagtttcagggtcatctcgaaggttcacaatcagctaca
tattacctgctaatgaaggaaaagaaggagtttgttgccattcctgctggatcctggtac
aactttaacaaggttgcgcaatataagcaattgactttggaggaagcagaagagaagatg
aaaaataggaaaaaaactgctgatggatatcaaagatggatgatgaaagcacctactgct
ttcggtgaacatgcgaaattagatgaaaaggaaaacaatgctggtggtgggagaggccgg
aaaaaaactggtgatgatgatgatgaaggtccctcttctgataaaggagaggaagatgaa
gatgaggaggtagataggaagagtagacttgggctgaataaaaaacctgcctatgacgaa
gatgacgaggaaggtccaaggggaggggaccatgatgaggatgattatgatgttgaaaag
ggtgatgattgggagcatgaagagattttcacggacgatgatgaagctgttggtaatgat
cccgaggaaagggaggatttggctcccgaagttcctgctcctcctgaaatcaagcaggat
gaagaggatgaggatgaagacaatgaagaaggaggtggtctgagtaaatctgggaaagag
ctgaagaagttacttgggcgaagtggtggtctgagtgactctgaagcagacgatgacgat
gatgacgacgacgatatggatgacgagggcagtgttcctcctgctactgctacaaagcaa
aaggaacctaaggaagaacctgttgacaacagtccttcgaaacctacagcaacaggatct
gctcgcggaacacctacttcaaagtcttcaaaggggaaaagaaaagcaaatgaagaaaca
aagccatctaataatgtaccacctaagaaagtaaagacagaaaatgaacaaaaaccatct
gaaaaagatctaaatggatctacagctaaaactagcgcacctccaagagctacaccacca
ccgtcatcaaacactgggtcttctaatgcagctactggacctgtaacagcggaagaaatt
acagctgttctaatgcaaagggctccattaaccacacaggagctcgtgggtaaatttaag
gccaggttaagatgttcagaggataagaaagcgtttgccgaaatcctgaagagaatctct
aagatacagaaatctacaaatggagccagttatgttatcctaagaaagaattaa
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